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BSR_Lac_UAPBR_effluent_at_36742_14

Organism: BSR_Lac_UAPBR_effluent_at_Firmicutes_59_13

near complete RP 46 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 12609..16298

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 1241.0
  • Bit_score: 1652
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 1241.0
  • Bit_score: 1652
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Brevibacillus sp. phR RepID=UPI0002DB67B5 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 1176.0
  • Bit_score: 1657
  • Evalue 0.0

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Taxonomy

[Clostridium] stercorarium → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3690
ATGGGCATTGCCGAGAGACCGATGGTGCGCAAGAGGATATCGTTCTCCAGGATAAAGGATGTTCTTGAAGTTCCCAACCTCATCGAGATCCAGCAGAAGTCCTACCAATGGTTTCTCGATGAGGGCCTGCTCGAGACGTTCCGCGATATCTCTCCGGTGCAGGACTTCACGGGAAACCTTGCCCTCGAGTTCACCGGATACTCGCTCGGGTCGCCCAAGTACACAGAGGACCAATGCAAACAGCGTGATGTGACGTACGCAGCTCCGCTCAAGGTGAAGGTTCGGCTGATCAACAACGACACTCGTGAGGTCAAAGAGCAGGAAGTGTTTATGGGCGATTTCCCTCTGATGACCGAGACCGGCACTTTCATCATCAACGGGGCTGAGCGAGTCATCGTCAGCCAGCTCGTACGGTCGCCGGGAGCCTATTTCGATAAGACAAAAGACACTTCCGGCAAGACGCTGTACAGCGCGTCCATAATCCCCAACCGCGGTGCCTGGCTGGAGTTCGAGACTGACGCGGCCGACGTCGTGTACGTGCACGTCGACCGGACGAGGAAGATACCGGCAACGGTTCTCCTGAGGGCGCTTGGATTCGGTTCGACTCAGCGCATAATGGAGCTGTTCGGCGAGAACGAGTTCATCCGGAACACGCTTGAGCGCGACAATACAAACAATGAGGAAGAGGCTCTGGTCGAGATCTATAAGAGGCTTCGCCCCGGCGAACCGCCTGCTGTGGAGAGCGCCAGATCTCTATTTGAGTCGCTATTCTATGACCCCAAGCGGTATGATCTTGGAGGGGTTGGGCGTTACAAGCTAAACAAGAAGCTTGAGCTTGCCGACAGGCTTATTGGCAAGACCTTGTCGAGGATCCTGATCAGCGAGGACGATATGCCGGGTCAGGCCGGGCTTGGCCCTATCGTTGACCCCGATACCGGCGAAGTGTTGGGCGTTACGGTCGACCCCAACACCGGAGAAGTGCTGGCCGACGCTGTCGGCTTCGAAGTGCCGCGCGCGGGCGAGATGATCAGAGCTCGCAGGGCAGAGGCGGTACGGATGGTCGAGCGCGCCCGGCATCTCACCGAGGCTCATGTGCTCGATCCTGATGGCAAAGAAGCGAAGATCCTGGGCAACGGCTATCTTGCGCCCGACATCAAGGTGATTACGCCTGCCGACATCGTGGCTGCAGTCAACTACCTGGTCAATTTGAATCACGGGATCGGCGTCACCGACGACATCGATCACCTTGGTAACCGAAGGCTCAAGTCAGTCGGCGAATTGCTGCAAAACCAGTTCAGGATAGGTCTATCACGCATGGAGCGTGTCATACGCGAGCGTATGACCATTCAGGATGTGGAGGCCGTTACCCCGCAGGCCCTCATCAACACCAGGCCCGTTGTGGCGGCTGTTAAGGAGTTCTTTGGGTCCAGCCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGGCGGAGTTGACCCACAAGAGGCGTCTGTCGGCGCTGGGCCCTGGAGGACTGTCGAGGGAGAGGGCCGGTTTCGATGTCCGCGACGTACATCACTCTCACTACGGCAGGATGTGCCCGATCGAGACGCCTGAAGGCCCCAACATTGGCTTGATCGGATCTCTCTGCACTTACGCTCGGATCAACGAGTACGGTTTCATCGAAACGCCCTACCGGAAAGTCGAGGATGGCAAGGCTACCAGCGAGATCCGATACCTTACTGCCGACGTCGAAGACAGATACACGATCGCCCAGGCGAACGAGCCGCTGAATGAGGGCGGCAGTTTCGTTAACCCCAAAGTCACGTGCCGGTTGAAGGAAGACATCGTCATCGTATCGCCCTCGCAGGTCGACTACATGGACGTGTCGCCCAAGCAGCTGGTGTCGATCGCCACCGCGCTCATCCCGTTCCTGGAGAACGATGACGCCGGGCGTGCGCTCATGGGTTCCAACATGCAGCGTCAGGCTGTGCCGCTCATCCGGACGGAGGCGCCGTTTGTGGGCACCGGCATGGAGCTCAAGGCCGCCGTTGACTCCGGGGTGGTAGTCGCAGCCAAGCGGGCCGGAATGGTGGAACGCGTCTGCGCCGACTTCGTGAGAGTGCGCAGGGATGACGGCGAGGTCGATCATTACAACCTAATGAAGTTTGCCCGCTCCAATCAGGGAACTTGCATGAATCAGCGGCCTATCGTAGGAGTGGGGCAGCGTGTAGAGGTCGGCGATGTTTTGGCCGACGGCCCGTCTACCGACCAGGGCGAAATGGCCCTCGGGCGCAATGTGCTTGTGGCGTTCATGCCCTGGGAGGGCTACAACTATGAGGACGCGATCCTCATATCCGAGCGCTTGGTGAGCGACGATGTGTTCACCTCGATTCATATTGAGGAGTACGAATCCGAGGCGCGCGACACCAAACTGGGGCCGGAGGAGATAACCCGCGACATCCCTAACGTGGGCGAAGATGCCCTGAAGGACCTGGATCATGAGGGGATCATCCGAGTTGGCGCCGAAGTGCGCACTGGAGATATCCTTGTGGGCAAGGTCACGCCAAAGGGTGAAAGCGAGCTTACGCCGGAGGAAAGACTGCTCAGAGCGATCTTCGGAGAGAAGGCGCGGGATGTGCGCGACACCTCTCTGAAGGTGCCTCATGGCGAGGCGGGCAAGGTAGTCGCGGTGCACGTGTTCTCGCGTGAAAACGGCGACGAGCTTGGCCCGGGCGTCAATAAGCTGGTGCGGGTGTATGTCGCCCAGAAGCGCAAGATCTCCGAAGGCGACAAGATGGCCGGTCGCCATGGCAACAAGGGCGTCATAGCCAGGATTCTACCCGTGGAGGACATGCCGTTTCTGCCTGATGGTCGCCCCATACAGATAGTCCTGAATCCGCTAGGCGTTCCGTCGCGCATGAACATCGGTCAGGTGCTTGAGACGCATCTGGGATGGGCATCGGCTGCGCTAGGCATGCACATTGCCACCCCGGTGTTTGATGGGGCGCGGGAGGACGATGTATTCGAGTATCTGGAGAAGGCTGGCCTGCCCCAAAATGGCAAGATGATGCTCTATGACGGCAGAACCGGCGAACGCTTCGACCGTCAGGTCACCGTGGGCTACGCCTATATTATGAAGCTCATGCACCTTGTGGACGACAAGATACACGCCCGTTCCACCGGGCCCTATTCGCTGGTTACCCAGCAACCGCTCGGAGGCAAGGCGCAATTCGGCGGGCAGCGCTTCGGGGAGATGGAGGTGTGGGCGCTGGAGGCATATGGCGCAGCGTACACTCTTCAGGAACTGCTGACAGTGAAGTCCGACGATATCGCAGGACGAGTGAAGACGTACGAAGCGATCGTCAAGGGCGACAATGTGCCCGAACCCGGAGTGCCCGAGTCTTTCAAAGTCCTCATCAAGGAATTGCAGAGCCTTTGCCTCGACGTCAAGGTGCTGTCAGATGACGAGCATGAGATCGAGATACGCGAGGCCGACGACGATATCGAAGGCACCGCCAGAGAACTGGGGATCGACATCGGCGACAGGTCCAGCAGGATCGACCGGATCGCCGGAGCTTATCGGGAGACGGAAGTGGCCGATGCGATCCCGGAAGATCAAAGCGACGACGAAGGCGGGGAGAAGGATGAGGATGCCGACTCCTCCGAGTTTGATGCTGACGACAGCGATGACGACAAGATAGATTAG
PROTEIN sequence
Length: 1230
MGIAERPMVRKRISFSRIKDVLEVPNLIEIQQKSYQWFLDEGLLETFRDISPVQDFTGNLALEFTGYSLGSPKYTEDQCKQRDVTYAAPLKVKVRLINNDTREVKEQEVFMGDFPLMTETGTFIINGAERVIVSQLVRSPGAYFDKTKDTSGKTLYSASIIPNRGAWLEFETDAADVVYVHVDRTRKIPATVLLRALGFGSTQRIMELFGENEFIRNTLERDNTNNEEEALVEIYKRLRPGEPPAVESARSLFESLFYDPKRYDLGGVGRYKLNKKLELADRLIGKTLSRILISEDDMPGQAGLGPIVDPDTGEVLGVTVDPNTGEVLADAVGFEVPRAGEMIRARRAEAVRMVERARHLTEAHVLDPDGKEAKILGNGYLAPDIKVITPADIVAAVNYLVNLNHGIGVTDDIDHLGNRRLKSVGELLQNQFRIGLSRMERVIRERMTIQDVEAVTPQALINTRPVVAAVKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFDVRDVHHSHYGRMCPIETPEGPNIGLIGSLCTYARINEYGFIETPYRKVEDGKATSEIRYLTADVEDRYTIAQANEPLNEGGSFVNPKVTCRLKEDIVIVSPSQVDYMDVSPKQLVSIATALIPFLENDDAGRALMGSNMQRQAVPLIRTEAPFVGTGMELKAAVDSGVVVAAKRAGMVERVCADFVRVRRDDGEVDHYNLMKFARSNQGTCMNQRPIVGVGQRVEVGDVLADGPSTDQGEMALGRNVLVAFMPWEGYNYEDAILISERLVSDDVFTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKDLDHEGIIRVGAEVRTGDILVGKVTPKGESELTPEERLLRAIFGEKARDVRDTSLKVPHGEAGKVVAVHVFSRENGDELGPGVNKLVRVYVAQKRKISEGDKMAGRHGNKGVIARILPVEDMPFLPDGRPIQIVLNPLGVPSRMNIGQVLETHLGWASAALGMHIATPVFDGAREDDVFEYLEKAGLPQNGKMMLYDGRTGERFDRQVTVGYAYIMKLMHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDIAGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLCLDVKVLSDDEHEIEIREADDDIEGTARELGIDIGDRSSRIDRIAGAYRETEVADAIPEDQSDDEGGEKDEDADSSEFDADDSDDDKID*