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BSR_Lac_UAPBR_inlet_at_60433_1

Organism: BSR_Lac_UAPBR_inlet_at_Alphaproteobacteria_55_21

near complete RP 41 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 1..3030

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 805.0
  • Bit_score: 1084
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y125_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 805.0
  • Bit_score: 1084
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 811.0
  • Bit_score: 1065
  • Evalue 0.0

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Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3030
CGCACCGGCTATCGCGAGCTTTTCGGCGCGGTGATGGATAACGATCCTTTGTACGAAGCTGTTTCAGCAGGGCAAGCCTTTCCCGGGATCGAACATTGGATGCCGCTTTTCTATCCGCGCCTTGCCGGACTTTTGGATTACGCGCCGGACGCGCCCGTTTTGTTCGATTATCAGGCCGAGGATGCCTTGCGCGAGCGGCAGCGGCAGATCGAGGATTTTTATGCCTCGCGCCTGTCTTTGTTTCAGGCCGCGCAGCGCGGGAAGAAAAAGGATGTCATCGCCTACAAGCCCGTTCCGGTGGAAAGACTGTATTTTTCTTTGGCGGAGATGGAAGAGGCTTTGGCTGCGCGGGCGGTGGGCGTTTTCTCGCCGTTTTCCCTTATGGGTCATGCCCGCGAAAGCGGGCATCCAGAGCCACAAGAATTAATAGAAGGTTTTGTTCCCCTAGACCCCCGCCTTCCCCCTACGCTCCTGCGGAGCTTCGGTGCGACAGGTCGCGGGGGTGACACAGAAAAGACGGATAGCTTTAACGCCTCTGCCCAGCGCGGGCGTAACGGAGATATTGGGAGTGGCGAGTCAACAAACATCGTCATGCCCGCGCAGGCGGGCATCCCATTTTCTTTTAACGCCTCTGCCCAGCGCGGGCGTGACTTTGCCGATGCGCGGGCGCTGGCGGAAGGCGATCTTTACGCCGCGCTCAAAGCCTATGCCGCGCAGCATCAAGCCGCCGGACGGCGCGTGGCCATCGCGTGCTATTCCCAAGGCTCTTCGGGCCGGATCGCCGCGCTTTTGCGCGGGCACGGGATCGACGCGCTGACAAGCGCGAAAAACTGGGACGAACTGCGCAAGCTCGACATCAAGCTTATGCCGCTTGTGATCCTTGGGCTCGAGCATGGCTTTGTCGCGTCTGATCTCGCGGTTGTGACCGAACAGGATTTGCTGGGCGACCGCTTGGTGCGCAAAAGTCGCAAGAAACGCGCCGCCGCGCAATTCGCTTTGGAACTTGGCAGCCTTAACGTCGGCGATTTTGTCGTTCACGCCGAACACGGCATCGGGCGCTATGAGGGGCTGGAGACAATCACCGCGCTGGGCGCGCCGCATGATTGCATCCGCGTTATTTATGACGGCGGCGACAAGCTATTCGTTCCGGTCGAAAATTTGGACGTTCTTTCGCGCTATGCTTCGGCGGATTCCGGCGCGGCTTTGGACAAGCTGGGCGGCGTGGCATGGCAGACGCGCAAGGCCAAGGTCAAGAAGCGGCTTTTGGAAATCGCGGACGAGCTTTTGAAGATCGCGGCGGCGCGGCAGCTCAGGCAGGCGGAGAAGATCGAAGTTCCCGAAGGCGCGTATCAGGAATTCGCGGCGCGTTTTCCCTATAACGAAACGGACGATCAGGAGCAAACGATTGAATCCGTCTTCGGCGATTTGGCCAGCGGCAAGCCGATGGATCGGCTGGTGTGCGGCGATGTCGGTTTTGGAAAGACGGAAGTCGCGCTTCGCGCCGCCTTTGCCGCCGTTCAAGCGGGAATGCAAGTCGCGGTCGTCGCGCCGACGACGCTTTTGGCGCGGCAACACACCAACAATTTCATCCAGCGGTTTCGCGGCTTTCCGGTGCGGATTGGCCAGCTTTCGCGCATGGTCTCGATGAAGGAGGCCAAGCAGACGAAGGAAGACGCCAAGGCGGGGCGGGTCGATATTGTCGTCGGCACGCATGCGCTTTTAGGCAAAGAAATCGGCTTTCAGCGCCTCGGCCTTGTGATCGTGGACGAAGAACAGCATTTCGGCGTGAAGCAGAAAGAACGGCTCAAGGAGCTTCGCGCCGACGTGCATGTTCTGACGCTGACCGCCACGCCCATTCCGCGCACGTTGCAGCTTGCCTTGACGGGCGTGCGGGAGCTGAGCCTTATCACCACGCCGCCGGTGGATCGGCTTGCCGTGCGGACGTTCGTTTTGCCGTTCGATCCGATGGTGATCCGCGAGGCTTTGATGCGCGAACATTATCGCGGCGGGCAGAGCTTTTACGTTTGTCCGCGCATTGCCGATCTGAAAGAAGTGACGGACACGCTGAAGGAACTTGTGCCCGAACTTAAAATGGTCACGGCGCATGGGCGCATGGGCGCGGGCGAGCTGGACGACATCATGACGGCGTTCGACGCGAAGAAGTACGATCTTCTTTTGGCGACGAACATCGTGGAATCCGGCCTTGATATCCCCAACGCCAACACCATCGTCATTCATCGCGCCGATATGTTCGGCCTTTCGCAGCTTTATCAGTTGCGCGGACGCGTTGGGCGGGCCAAGCAGCGCGGCTATGCTTATTTGACGTACGCGCCGACGGCGGCGCTCTCGCAGACCGCGCAGCAAAGGCTTGAGGTCATCTCCACGCTCGATCAACTCGGCGCGGGATTCCAGCTTGCCAGCCACGATATGGATATTCGCGGGGCGGGCAATCTGCTGGGCGAGGAACAATCCGGCCATATCCGCGAGGTCGGCGTGGAGCTTTATCAGCAAATGCTTGAAGACGCCGTCGCCGCCGCCAAGGAAGGGCGCGGCTTGGCGGTAGAGGCCGTTTCCGCCGAACGCTGGACGCCGCAAATTAACATCGGTCTTTCCGTCATGATCCCCGAAACCTATGTGCAGGATTTGAACGTCCGGCTGGGGCTTTATCGGCGTTTGGCGGATGGCGGGCAGGAGGAGGACATCGAGCAGATCGCCGCCGAGATGGTGGATCGTTTCGGCCCCTTGCCGGACGAGGTGGAAAACCTGCTTCAGACCATGGAGATCAAGCGCCTTTGCCGTCAGGCTGGGGTGTCCAAGCTGGACGCGGGGCCAAAGGGCGCGGTGATTGGCTTTCACGAAGACAGGTTCGCCAAGCCCGAAAAGCTGATGGCGTGGATTATCGAACAAGCCGGAACGGCTAAAGTCCGGCCCGATCAAAAGCTGGTTCTGGTCAGGGCTTGGGATGATCCTTTGCGGCGGCTTGAAGGGGCCAAGAAGGTCTTGGGCGAGATGGCTTCGTTGGCCCTTTGA
PROTEIN sequence
Length: 1010
RTGYRELFGAVMDNDPLYEAVSAGQAFPGIEHWMPLFYPRLAGLLDYAPDAPVLFDYQAEDALRERQRQIEDFYASRLSLFQAAQRGKKKDVIAYKPVPVERLYFSLAEMEEALAARAVGVFSPFSLMGHARESGHPEPQELIEGFVPLDPRLPPTLLRSFGATGRGGDTEKTDSFNASAQRGRNGDIGSGESTNIVMPAQAGIPFSFNASAQRGRDFADARALAEGDLYAALKAYAAQHQAAGRRVAIACYSQGSSGRIAALLRGHGIDALTSAKNWDELRKLDIKLMPLVILGLEHGFVASDLAVVTEQDLLGDRLVRKSRKKRAAAQFALELGSLNVGDFVVHAEHGIGRYEGLETITALGAPHDCIRVIYDGGDKLFVPVENLDVLSRYASADSGAALDKLGGVAWQTRKAKVKKRLLEIADELLKIAAARQLRQAEKIEVPEGAYQEFAARFPYNETDDQEQTIESVFGDLASGKPMDRLVCGDVGFGKTEVALRAAFAAVQAGMQVAVVAPTTLLARQHTNNFIQRFRGFPVRIGQLSRMVSMKEAKQTKEDAKAGRVDIVVGTHALLGKEIGFQRLGLVIVDEEQHFGVKQKERLKELRADVHVLTLTATPIPRTLQLALTGVRELSLITTPPVDRLAVRTFVLPFDPMVIREALMREHYRGGQSFYVCPRIADLKEVTDTLKELVPELKMVTAHGRMGAGELDDIMTAFDAKKYDLLLATNIVESGLDIPNANTIVIHRADMFGLSQLYQLRGRVGRAKQRGYAYLTYAPTAALSQTAQQRLEVISTLDQLGAGFQLASHDMDIRGAGNLLGEEQSGHIREVGVELYQQMLEDAVAAAKEGRGLAVEAVSAERWTPQINIGLSVMIPETYVQDLNVRLGLYRRLADGGQEEDIEQIAAEMVDRFGPLPDEVENLLQTMEIKRLCRQAGVSKLDAGPKGAVIGFHEDRFAKPEKLMAWIIEQAGTAKVRPDQKLVLVRAWDDPLRRLEGAKKVLGEMASLAL*