ggKbase home page

BSR_Lac_UAPBR_inlet_at_137920_25

Organism: BSR_Lac_UAPBR_inlet_at_Alphaproteobacteria_55_21

near complete RP 41 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(25571..25900)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMR4_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 106.0
  • Bit_score: 152
  • Evalue 1.70e-34
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 99.0
  • Bit_score: 153
  • Evalue 1.40e-34
ihfA; integration host factor alpha-subunit (IHF-alpha) similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 106.0
  • Bit_score: 152
  • Evalue 4.70e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGCCAGAGACGACCGTCACCCGCGCCCAGCTTGCCGAGGCCGTTTATCAGGAAGTTGGCCTTTCGCGTAACGATTCTTCCCAGCTTGTGGACGTTATTCTTGAAGAAATTAGCCAAGCCCTTATCAAGGGCGATATGGTCAAGCTTTCTTCATTCGGAAGCTTCCAAGTGCGAAGCAAAGCGCAGCGCATCGGGCGCAATCCCAAGACGGGCGAGGAAGTTCCCATCCTTCCTCGGCGTGTTTTGGTCTTTCGTGCCAGCCATGTCCTCAAGGACAAGGTGAACCGTACGCTCAGCACGGGGGTTGCCTCGGGCCGAGGTGGCGTATGA
PROTEIN sequence
Length: 110
MPETTVTRAQLAEAVYQEVGLSRNDSSQLVDVILEEISQALIKGDMVKLSSFGSFQVRSKAQRIGRNPKTGEEVPILPRRVLVFRASHVLKDKVNRTLSTGVASGRGGV*