ggKbase home page

BSR_Lac_UAPBR_inlet_at_79237_3

Organism: BSR_Lac_UAPBR_inlet_at_Clostridiales_61_7

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 4
Location: comp(1473..2744)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat family protein n=1 Tax=Clostridium difficile P50 RepID=T4R9P1_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 251.0
  • Bit_score: 92
  • Evalue 7.90e-16
Ribosomal protein L7/L12 {ECO:0000313|EMBL:CDA20716.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 108.0
  • Bit_score: 86
  • Evalue 8.00e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:488 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1272
ATGGCAATCAAGGCAATGCGCTGCACGCAGTGCGGCGCGCAGCTGGAGCTGGACGATCAGAGGGAGTTTGGCTTTTGCTCTCATTGCGGAACAAAGCTCATGCTTCGGGAGACAGTCAACGTAAAGCATTCCGGGACGGTACAGCTGGACACCTCCGGACGGGCGGGCAACCGACTGCGTCTGGCGGACCAGGCCTGTGAGGCGGGCAACTGGAGTGAGGCCTATAACTATTACACCAAGGTATTGGAGGACGACGCAGACAATTATTGGGCGCTGTACCGCAAGGGCATCTGCGCTGTTATCCTTTCGGAGCCCGAGAACCTGCGCACCCCCGAGCTGAAGCTCTGCGCCGGCGAGGGGCGGCGGATACTGGACGGCCTGCTTGCGGAGACGGAGGACGGCAGCGAGCGGGAAAAGGCGCTGCTTGCGGAGCTGCTGGTGCAGGAGCGGATGATGCACCAAATCAGTCTGAACATTCTGGAGGACTGCCGTTCACGATTTTATGTCAAGCTGTCCAGCAAGAACGAAGGCCATGCCCAGGCGGCCCGTCAGTGCGAGGCTGCAAAGCTGCTGGAGGTGGCCACCGATCTGCTGCACGATTCCGAGCTCAAGGAGGAGCTGCTGGACAAGGCCGTCCGCTTCTGCGATGAGGCGCTGAACACAAGGGTTCAGGTTTACACGCATACCACCACCGACAAGAAGGGGAACCGGAAGGATCATTTCGAGCCTTACGTCATGGACAGCGGCAGAAGGAGCATCATAACCGGTTGCCGCAGCACCTGTGCGGAGCGATATAATACATTGCCCTCCCGCTTGGAAAAGATGAGTCAGATGGAGAGCATGCTGGGCGAGCTGGACTCCCAGCGAGGAGAGCTGAAGAATGCCATGGACGCCGCTCAGGGCGCCTTTGACAATGCCGCTGCCGCCTTCTGGCAGGGCAATCCGGAGCTTCTCGCCCGCCGGAGCAAGCGAAAGAATCTGAGCTGGATCGCCGTTGGAGTGGGAGTCGCGGCTCTGGCTGCCTCGCTGTTCATGATGAATTCTTCAATTCTGTATCCCATCGTCGGCGCGGCGCTGGCCGTCGTCTCCTTTTTTATAAAAAAGTCGATCGCCAAGTCCGCCGTCGCCAAGCTGGAGGAACAGGTGTTTCCGCCGGAGGTGAAGGCTCTCCGGGAGGGCCTGTTCGCGGCCCAGGACAACTGGGCGACCAAGCAGCGGGAGTTTAGCGCGAAGCAGGCGGAAAAGGCGTCCTTCGTTGCCTCCCAGAAGTGA
PROTEIN sequence
Length: 424
MAIKAMRCTQCGAQLELDDQREFGFCSHCGTKLMLRETVNVKHSGTVQLDTSGRAGNRLRLADQACEAGNWSEAYNYYTKVLEDDADNYWALYRKGICAVILSEPENLRTPELKLCAGEGRRILDGLLAETEDGSEREKALLAELLVQERMMHQISLNILEDCRSRFYVKLSSKNEGHAQAARQCEAAKLLEVATDLLHDSELKEELLDKAVRFCDEALNTRVQVYTHTTTDKKGNRKDHFEPYVMDSGRRSIITGCRSTCAERYNTLPSRLEKMSQMESMLGELDSQRGELKNAMDAAQGAFDNAAAAFWQGNPELLARRSKRKNLSWIAVGVGVAALAASLFMMNSSILYPIVGAALAVVSFFIKKSIAKSAVAKLEEQVFPPEVKALREGLFAAQDNWATKQREFSAKQAEKASFVASQK*