ggKbase home page

BSR_Lac_UAPBR_inlet_at_91607_4

Organism: BSR_Lac_UAPBR_inlet_at_Clostridiales_61_7

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 4
Location: 2117..2854

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EXH3_CLOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 186.0
  • Bit_score: 157
  • Evalue 1.20e-35
Sigma-70 region 2 {ECO:0000313|EMBL:ERI97746.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 186.0
  • Bit_score: 157
  • Evalue 1.60e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 184.0
  • Bit_score: 114
  • Evalue 3.20e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. ATCC 29733 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 738
TTGGATGAACAGAGGATTGTCGCAAAGCTGAAGGCGGGACAGCCCCGCGCACTGGAAAAGCTCATAGATTTGTACGGGGGCTACGTCTATTCGGTGGCGAAGGGCGTCCTCGCATCCCTGCTGTCCCGGGAGGACATGGAGGAGGTGGTCTCCGACGTGTTCGCCGCCCTGTGGGAGAGCCGGGACCGGCTCATGGACGGCGCGCCTGTTAAGCCCTATCTGGCAGCCATCGCCCGCAACACCTCCCGCAAGCGGCTGCGGGGATTGCGCCCCGTGGAGCCGCTGGAGGAGGACCTTCCCGAGGAGGAGGGCGGTCCGGAGGAGCTACTTACGGAGCAGGAGGAGCAGGAGGCCGTGAGGCTGGCGCTGCTGTCCATGGAGCCCCGGGACCGGGAGATATTCCTGCGGCATTACTACCGCTGCGAGCCCGTGCGGGAGATCGCCGGGGCCATGGGGATGAACGAATCCACGGTCAAGAGCCGGCTGCTTCGGGGAAGACAGAGGCTCAGGGCCATTTTAACGGAGAGGGGATACGGCATTGAAGCGGAGAATATCCGAGCTGCTTTTGAATATGCCTGTGGAGGAATTCTTGCCGAGGGGGCGGGAGGAAGAGATATCTCTCTCCCGGGTCAAGCGGCTCACCATGAAAAAGATTCAGACGGAGGAGAAAAAGACAATGAAGCTATCAAGATTTCCGCTGCGGCTCGTGGTTGCCGCGGCGCTTGTGGCGGCGCTTAG
PROTEIN sequence
Length: 246
LDEQRIVAKLKAGQPRALEKLIDLYGGYVYSVAKGVLASLLSREDMEEVVSDVFAALWESRDRLMDGAPVKPYLAAIARNTSRKRLRGLRPVEPLEEDLPEEEGGPEELLTEQEEQEAVRLALLSMEPRDREIFLRHYYRCEPVREIAGAMGMNESTVKSRLLRGRQRLRAILTERGYGIEAENIRAAFEYACGGILAEGAGGRDISLPGQAAHHEKDSDGGEKDNEAIKISAAARGCRGACGGA*