ggKbase home page

BSR_Lac_UAPBR_inlet_at_116448_2

Organism: BSR_Lac_UAPBR_inlet_at_Clostridiales_61_7

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 4
Location: comp(361..603)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TI07_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 80.0
  • Bit_score: 110
  • Evalue 7.00e-22
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC73033.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 80.0
  • Bit_score: 110
  • Evalue 9.80e-22
Helix-turn-helix. similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 78.0
  • Bit_score: 91
  • Evalue 7.30e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:272 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 243
ATGACGATTGGGAAAGCGGTGGCGGATCGGATCGGGCAGCTGTGTGAGGAGCGGGGGATCACGCTCAACCGGCTGGCTACCCTATCCGGGGTTACCCAGTCCACCCTGAACAACATTGTGAGCGGCGTCAGCAAAAATCCTACGGTGGCCACTGTCAAAAAGGTCTGCGACGGTCTGGGCATCGATGTTGTGGAGTTTTTCGACACTCCGGTGTTCAGGGGGCTGGAGCAGGAGATACAGTGA
PROTEIN sequence
Length: 81
MTIGKAVADRIGQLCEERGITLNRLATLSGVTQSTLNNIVSGVSKNPTVATVKKVCDGLGIDVVEFFDTPVFRGLEQEIQ*