ggKbase home page

07M_4_2014_scaffold_2824_8

Organism: 07m_4_2014_Parcubacteria_38_152

near complete RP 41 / 55 BSCG 43 / 51 MC: 2 ASCG 8 / 38
Location: 5684..6034

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S06H3_C01522 {ECO:0000313|EMBL:GAH97190.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 116.0
  • Bit_score: 114
  • Evalue 1.30e-22
50S ribosomal protein L17 id=3834882 bin=GWB1_CP_36_13 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 117.0
  • Bit_score: 108
  • Evalue 3.80e-21
50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 124.0
  • Bit_score: 106
  • Evalue 4.10e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 351
ATGAGACATTTAAATAAGGTAAAAAAATTGGATCGATCGGCATCTGCCAGAAAAGCATTGTTAAAAAGCTTAACCGGTTCATTGATTAGCGCTGAAAAAATTATTACGACAAAAGCAAAAGGAAGAGCGCTTGCTCCTCATGTCGAGAGATTGATAACACGCGCTAAGAAAAAAGACTTAGCCGCTGAAAGATACCTTTTAAGATTTGTTCCCGCTATTTTTGTAAAAAAATTGATTTCTGAAATAGCTCCTCGATATTCAACCAGGAACGGCGGTTATACTCGTTTGACTAAGATTGGCACGCGCCAGCATGATAAAGCGGAATTGGTTGTTGTTGAATTATTAAAATAG
PROTEIN sequence
Length: 117
MRHLNKVKKLDRSASARKALLKSLTGSLISAEKIITTKAKGRALAPHVERLITRAKKKDLAAERYLLRFVPAIFVKKLISEIAPRYSTRNGGYTRLTKIGTRQHDKAELVVVELLK*