ggKbase home page

07M_4_2014_scaffold_312_6

Organism: 07m_4_Miz_z4_200_2014_Elusimicrobia_37_6

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 10 / 38
Location: comp(4008..4793)

Top 3 Functional Annotations

Value Algorithm Source
transketolase (EC:2.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 254.0
  • Bit_score: 206
  • Evalue 8.60e-51
transketolase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B7B388 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 261.0
  • Bit_score: 325
  • Evalue 4.50e-86
  • rbh
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 258.0
  • Bit_score: 390
  • Evalue 1.60e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF03_38_15 → RIF3 → Bacteria

Sequences

DNA sequence
Length: 786
ATGATACCTGTTTGCAAAGAGATTAGAAAAGATATCATAAAAATATCAAGAGCAACTGGACACGGCCATTTGCCCACTTGTTTTTCCGTGATTGAAATAATTTATGCCGTATATGACACGATGCGGCATGATTCTAAGAATCCGGCATGGGATGAAAGAGACATTTTTATATTAAGTAAAGGACACGCTGCGCTTGCACAGTATTGTGTATTGGCGCATTTTGGTTACTTTCGCATTGAAGAAGTTTATTCCTTTGGCAAGTTTATGTCAAATTTTGGATGCCATGCAGACAGATTCAAGGTGCCTGGTATTGAGGTTTCCACCGGTTCATTAGGACACGGGATTGGAATAGCAGTTGGTATAGCATTCGCTTTCAAACTCCAAAAAAATAATAGAAAGGTTTTTGTGCTTATTGGAGATGGCGAATCAAATGAGGGATCTGTTTGGGAAGCAATTTTGGTTGCGGTTAATCTTAATCTTAACAATTTAACAGTCATATATGATAATAATATGTCTCACTCCAGGGGGTTACAGATACAAAATCCAGCAGAAAAGATGAAAGCATTTGGATGTGAAGTTTGCGAAGTCAACGGACATGATGTTGAATTACTTAAAAAAGAAATGATAAAACAATCTCATTTGGTAAAAGCAATTATAGCAAATACGAAGAAAGGATATGGTTGTAAAACATTTGTAAGTGATCACTATGCATGGCATAGAAGATCACCTAATGAACAAGAATTTGACTGTCTTATGAGGGAATTAGAAGATGAGAAAACAATTTAA
PROTEIN sequence
Length: 262
MIPVCKEIRKDIIKISRATGHGHLPTCFSVIEIIYAVYDTMRHDSKNPAWDERDIFILSKGHAALAQYCVLAHFGYFRIEEVYSFGKFMSNFGCHADRFKVPGIEVSTGSLGHGIGIAVGIAFAFKLQKNNRKVFVLIGDGESNEGSVWEAILVAVNLNLNNLTVIYDNNMSHSRGLQIQNPAEKMKAFGCEVCEVNGHDVELLKKEMIKQSHLVKAIIANTKKGYGCKTFVSDHYAWHRRSPNEQEFDCLMRELEDEKTI*