ggKbase home page

07M_4_2014_scaffold_4219_4

Organism: 07m_4_Miz_z4_200_2014_Elusimicrobia_37_6

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 10 / 38
Location: comp(2416..4254)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein id=3211368 bin=GWA2_Elusimicrobia_69_24 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia similarity UNIREF
DB: UNIREF100
  • Identity: 30.8
  • Coverage: 611.0
  • Bit_score: 257
  • Evalue 3.50e-65
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 25.5
  • Coverage: 534.0
  • Bit_score: 130
  • Evalue 1.80e-27
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 599.0
  • Bit_score: 729
  • Evalue 3.40e-207

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Elusimicrobia_34_15_curated → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 1839
ATGATTATAGCAAACAACCATAACAAGCAAGTCACAACCCCGTTTATAGTTTTCCTGTCCGGCGTGTTATTTTTTCTGATTCCCATCGTGCCCGACGAAAGAATTACAAGATGGAAACTGTGGTTTCTTTCAACGGGACTTTTTTCAATTATTGTTTTGTGGACGGTTCACAAGTTATTTTATGACAAACTAAACCCTGTCGGAAATCCCGCTCTGCGGGACGCCATTTCTAACAGGGTAAACCTTAAAATTTCTCAATTGAATAAACCGGTATTTATCTGGTTTGTTTTTGTTGTTTTTATGTATCTGATATCTAAAAACAAACATGTGGCGGAATTGGAACTTTACAGAGTGATAGTTTCGTCGGCGTGTTTTTTTCTTTTTTCCAATTTATTAGAGAATAAACAAAACAGAAACACCGTGATAATTTTTTGGATTATTGGGGGCTTTCTTGCGGCGGTGTATGGAATTATGACTCACTACGGCGGGTTTTGGATTGTAAGGACGCCGCAAGTGAACAGAATTTTTTCAACTTTTGGCAATCCCATATTTTTCGCCGCATTTCTTGTTGCTACAATTCCGCTTTCAATTTATAAGTTAATACAGGAGCGAGAACTGTTGCATAAGGTTCTGTGGTTTTTCGTTTTAATTTCTTTTTTGGTTGCACTGTATTTTACCAAAACCCGTGCCGGATGGATTGCTTTTATCGTCTCAATTATGGTTTTTATTTTTTTATCATTGAATTCAAAAGTTATCAAGTTAATTCTAATTTTTGTTTTGGTAATTTTTGGATTTTTGTTCACTTTGAAAACGAAAAATGTCTGGATGCGTCAGCAGGGGCATCTTGTTATATGGCGTGATTCATTAAGAATGCTTTTTGCTCAACCGGTTTTGGGAGTCGGACTTGGCAGTTTCCATATAAATTTTCCCGATTATGCATCAAACGAACTCAAAAAGATCTGGCCTCAGACGCAAAATATCGTCAACGATGCCCACTCGGAGTTTGTCCAGATTCTTGCTGAGTTGGGAGCCGTCGGTTTTGGGATTTTTCTATGGATACTTTTTTCAGTGTTTCATCACGCGCATCAATTTTATAAACGGACTCACGATAGAGAAGAATTTTTAATTTATACCGCATTATTTTCGTCGGCGATTGGACTTTTAGTTCAGAATCTTTTTTCAGTTGATATGCGTTTCACGATTTCCTCGTTTTACCTTTTTTCCATATTCGGAATACTTTCGTCTTTTTCAACGGTAAAAACGAAAGAGATAAAATTGGGAAAAGCCGAAAAGTTTTTTATGTTGCTTATACTTTTTGCATCGGTTGCTTTTTGTGAATATCAGATGGTTATAAAACAGTACAGAAGTTGGAAGATTGTTTTTGAAAGTAAGGATTTTTTGGATAAAAGAATTGTTAATTCCGCCGACCAAAAAAAAGAAATTGAAAAAATGATCGCTTCAAATCCGAACGATGCCCGTCTCTACTTCAAATTGGGTTATCTTCTATCTAACGAAATCAAAGTTAACAAATCCGCCACCACCCTCGCCATAGCAAATTTTACAAAAGCATCGCAACTTGACCCAAATGTTGAAAACGGCGGCGCATTTAATAATCTCGGGAATATCTATTTTACTGTAGGCAACAAAAAAAGTGCAAAAGAAAATTACATCAAAGCAATCAGCATAAATCCTTCTTTAATTGATGCCCGCCTAAATCTTGGCATTGCGTATTATTACGAGGGAAAATTAAAAGAAAGTTCGGCGGAGTTTGAAAAGGTCTTGGAACTTGACCCGAAAAGCTCATCCGCTATCTATATGCTGAAAAAAATGAGAGAATGA
PROTEIN sequence
Length: 613
MIIANNHNKQVTTPFIVFLSGVLFFLIPIVPDERITRWKLWFLSTGLFSIIVLWTVHKLFYDKLNPVGNPALRDAISNRVNLKISQLNKPVFIWFVFVVFMYLISKNKHVAELELYRVIVSSACFFLFSNLLENKQNRNTVIIFWIIGGFLAAVYGIMTHYGGFWIVRTPQVNRIFSTFGNPIFFAAFLVATIPLSIYKLIQERELLHKVLWFFVLISFLVALYFTKTRAGWIAFIVSIMVFIFLSLNSKVIKLILIFVLVIFGFLFTLKTKNVWMRQQGHLVIWRDSLRMLFAQPVLGVGLGSFHINFPDYASNELKKIWPQTQNIVNDAHSEFVQILAELGAVGFGIFLWILFSVFHHAHQFYKRTHDREEFLIYTALFSSAIGLLVQNLFSVDMRFTISSFYLFSIFGILSSFSTVKTKEIKLGKAEKFFMLLILFASVAFCEYQMVIKQYRSWKIVFESKDFLDKRIVNSADQKKEIEKMIASNPNDARLYFKLGYLLSNEIKVNKSATTLAIANFTKASQLDPNVENGGAFNNLGNIYFTVGNKKSAKENYIKAISINPSLIDARLNLGIAYYYEGKLKESSAEFEKVLELDPKSSSAIYMLKKMRE*