ggKbase home page

LAC_acetylene_scaffold_38085_163

Organism: LAC_acetylene_Firmicutes_46_580

near complete RP 48 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(166609..168264)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB id=1757400 bin=GWE2_Firmicute_51_13 species=Ruminococcus champanellensis genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 560.0
  • Bit_score: 632
  • Evalue 3.60e-178
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 560.0
  • Bit_score: 477
  • Evalue 3.20e-132
Tax=GWF2_Firmicutes_51_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 560.0
  • Bit_score: 605
  • Evalue 5.10e-170

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Firmicutes_51_9_curated → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1656
ATGAAACATCTCTCACTCGAAGACATGCTGATCCGGGAGAAGATCCTGACCACAGCCCAACTTGAAGAAGTCAATCTAATCCAGAGACAAACTGGTCAGGCGACTTTCCATATCATCCTGGATAATCACTTTGCCAAAGAAACCGATGTCTTGAAAATACTGGCGAAAAGTCTTGGTATGGAATACATCGACAGTCTTTCAGGCAGTATCAATCCGGACAGTGTCCGTATTTTCCCCGAGAAACTGGCACGCAAATATCGCATGGCACCTCTCAGGATCATCGAAGGCACGTTGACATTGGCTGTCAGCAATCCTTTCAACTTGCCTGCGATCGAAGACATCTCGATGATCACCGGGATGAACGTCCAAACCATACTTTCGACCAAGAGCGAGATAGACAATGCGATCAGCCGCCTTTTCAAGCCGAGATCCACAAATGGAAATGATGATGACTCGACACGCCAAGAAGTTGAGTTGGAACTGGAAGAGCATCTGGAAACCTCACCAGCTGTCAAATTGGTCAACGCTTTGATCCTGGAGGCCTACAAGAAAAATGCCAGTGACATCCATCTGGAGCCCGAGGCCAATATGACTAGGGTCCGTTTCCGCATCGATGGAGACATGGTAAAGTACGGCGACTTCGATAAGGATATGCATTCATTGATATCAACCCGTATTAAAATCCTGAGTGGGCTCAACATTGCGGAGAAACGCTTACCCCAGGATGGTAGTTTCCAATTCAATAAGGATTTCAAGAAAATCGACATCCGGGTTTCCACTTTACCAACACCATATGGTGAAAACATCGTCATGCGTCTGCTTGGAGCCGACCAGAACATCGAGTATTCCCTTTCGGGACTGGGTCTGTCTGAGAAATCGATGACCATCATCGAGAAAGCCATCAAAGTCCCCCATGGTATCATTCTGATAACCGGTCCAACCGGTAGCGGTAAGACAACCACCTTGTATTCGATGTTGACGAAATTGGCTTCCCCACAGCGCACTGTCAAGACCATCGAGGATCCGATTGAACGAAAGTTCGATGGGATCACCCAAGTACAAGTCAACCAAAAAGCCGGTCTGACATTTGCGACAGGCTTGCGTTCGATATTACGTCAGGACCCTGACATCATCATGATCGGTGAGATCCGAGATGTAGAGACGGCAGAGATCGCCATACGGGCTGCCATTACCGGCCACTTGGTGCTCTCGACCATCCATACCAATGACGCCTTGTCCACGGTCTCCCGTTTGGTTGACATGGGTATTGAGAACTTCATGGTCGCAACTTCCGTAGTCTGTGTCATCTCACAGCGTTTGGTCAAACGCATCTGCATCCATTGCAAGGAAGTCGTGGAAATGACCCCTTCCGAGCAGCGTCTGTTGAAAACCGACCTCAAACTTGCCTATCATGGCAAAGGCTGTGCCCGCTGCAACCATACCGGTTACGCCGGTCGCGCTGCCGCCTTCGAGATCGTATTGATCGATAGCAAGCTTGAGGAAATGATCGTCAAGAATGCTTCCGTCGATGAGATGCGCGATTATGCCCAGACGAAACAGATGCGTACGCTCCGCGATGAAGTCACGGATTACGTAGCGTCAGGCGTGACTTCAGTCGAGGAAGCGCTCAGGATCCTTTACAACACGGAAGTCTAG
PROTEIN sequence
Length: 552
MKHLSLEDMLIREKILTTAQLEEVNLIQRQTGQATFHIILDNHFAKETDVLKILAKSLGMEYIDSLSGSINPDSVRIFPEKLARKYRMAPLRIIEGTLTLAVSNPFNLPAIEDISMITGMNVQTILSTKSEIDNAISRLFKPRSTNGNDDDSTRQEVELELEEHLETSPAVKLVNALILEAYKKNASDIHLEPEANMTRVRFRIDGDMVKYGDFDKDMHSLISTRIKILSGLNIAEKRLPQDGSFQFNKDFKKIDIRVSTLPTPYGENIVMRLLGADQNIEYSLSGLGLSEKSMTIIEKAIKVPHGIILITGPTGSGKTTTLYSMLTKLASPQRTVKTIEDPIERKFDGITQVQVNQKAGLTFATGLRSILRQDPDIIMIGEIRDVETAEIAIRAAITGHLVLSTIHTNDALSTVSRLVDMGIENFMVATSVVCVISQRLVKRICIHCKEVVEMTPSEQRLLKTDLKLAYHGKGCARCNHTGYAGRAAAFEIVLIDSKLEEMIVKNASVDEMRDYAQTKQMRTLRDEVTDYVASGVTSVEEALRILYNTEV*