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LAC_acetylene_scaffold_3553_9

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 5143..6150

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 335.0
  • Bit_score: 559
  • Evalue 2.50e-156
DNA-directed RNA polymerase subunit alpha n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RPOA_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 335.0
  • Bit_score: 559
  • Evalue 1.80e-156
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 335.0
  • Bit_score: 559
  • Evalue 5.10e-157

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGCAGAGAAACTGGCGCGAATTGATTAAGCCCAAGCGCTTGGAATCCGAGGTTCAGGAGAAGCCGGACGTGCACGGCAAGTTCGTGTGCGAACCGCTCGAGCGCGGTTTCGGCGTGACCTTGGGCAACGCCCTAAGGCGGGTCCTCCTGTCCTCACTTCAGGGTGCCGCCATCACCAATGTGAAAGTGGACGGGGTGTTGCACGAATTCGCAACGATTCCGGGCGTCCTCGAAGACGTGACGGACGTCATCCTGAACCTGAAGGAAGTTCGGCTCAGGATGTCGGGCGATGGCACGCGGCACTTGGTGATCGAAAAGGAAGGTGAAGGGGACGTGAGCGGCCGGGACATTCAACCCAATCCCTACGTGGACGTGTTGAACCCGGATCAGCACATCTGCACGCTGGCCAAAGACGCCAAGCTGCGGATGGAACTCACGGTGAAACAGGGCAAAGGGTACGTTCCCGCGGATCGGAACGTCGAAGAAGATCAGCCCATCGGTTCCATTCCCATCGACGCCATCTTCTCGCCGGTGCGGAAGGTCAACTATGTCCTTTCACAGGCGCGCGTCGGGCAAATCACCGATTACGACAAGTTGACCATGGATATCTGGACCGACGGGAGCATCAAGCCCGAGGATGCCCTGGCCTATGCGGCCAAAATTCTCAAGGATCAGCTCTCGATTTTTATCAATTTCGAAGAAGAAACCGAATCGACCGAAGAAGAATCACGGCCTGAGCCCGCGTTCAACGACAATCTGTTCCGTAGCGTGGACGAACTCGAGCTCTCGGTGCGCTCGGCCAACTGCCTCAAGAATGCGGACATCCGCTTCATCGGCGAGTTGGTGCAGAAGACCGAGGCGGAGATGCTGAAGACCAAGAATTTCGGGCGCAAGTCGTTGAACGAAATCAAGGAAATCTTGACGGAGATGGGCCTGGCTCTGGGCATGAAGATCGACAACTTCCCGAGCCGCGGAGAGATCGAGGAACGCAGAAAGGAACAGGAATAA
PROTEIN sequence
Length: 336
MQRNWRELIKPKRLESEVQEKPDVHGKFVCEPLERGFGVTLGNALRRVLLSSLQGAAITNVKVDGVLHEFATIPGVLEDVTDVILNLKEVRLRMSGDGTRHLVIEKEGEGDVSGRDIQPNPYVDVLNPDQHICTLAKDAKLRMELTVKQGKGYVPADRNVEEDQPIGSIPIDAIFSPVRKVNYVLSQARVGQITDYDKLTMDIWTDGSIKPEDALAYAAKILKDQLSIFINFEEETESTEEESRPEPAFNDNLFRSVDELELSVRSANCLKNADIRFIGELVQKTEAEMLKTKNFGRKSLNEIKEILTEMGLALGMKIDNFPSRGEIEERRKEQE*