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LAC_acetylene_scaffold_36169_2

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(1159..1965)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 260.0
  • Bit_score: 321
  • Evalue 7.20e-85
tRNA pseudouridine synthase A n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIV1_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 260.0
  • Bit_score: 321
  • Evalue 5.10e-85
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 260.0
  • Bit_score: 321
  • Evalue 1.40e-85

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGCCACACCACGACGTGCAGGCCAAGCGCAACTTCAAGCTGGTGATCGAATACGACGGTTCCAAATACCACGGCTGGCAGCGTCAACAAGGTGCACTCACCATCCAGGAGGTTCTCGAGTCCTGCCTGGAGGTCATGCTACAGACGTCGGTCCGAGCCAAAGCCTCGGGGCGGACCGACGCCGGGGTTCACGCCAGGGGGCAGGTGGTCAGTTTCGCCTGCCGCACCCGACTGCGACCCGGGGATATCCACCGGGGCCTCAACAGCCTTCTCCCACCCGACATCGTCGTGCTCACAGCCGATGAAATGCCCGATTCCTTCCATGCCCGCTTCTCCGCCTCGAGTAAGACCTACGCGTACAGGATTCTGAACCGTCCCGTGCCCTCGGCCCTTGAGAGGGGATTCTCATGGCATATCCCGCAGCCGCTGTGCCTGTCGGAGATGCTGGACTGTCTCCGCATTCTCGAGGGGGACCACGATTTCGCAGCCTTCATGGCGTCGGGATCTTCCGTCACATCCACGCGGCGTCGCATGATTCGAGCGGATCTGGAACGGCCCGACGAGGACCACCTCGTCTTTCATTTCGAGGCGAACGGGTTTCTGCGTCACATGGTTCGAACCCTTGTGGGGACCGTTGTCGCGGTGGGCAGGAGGAAGCTCACACCGCCTGGCTTCCGTGCAATACTGGAAAGCAAGGACCGGCGCAAGGCGGGGATGACGGCGCCGGCCCACGGTTTGTACCTGGTTTGCGTCAATTATGACGAGGAAGTATGTTCGCCGGATCGGCAGAAGGGATCACACACATGA
PROTEIN sequence
Length: 269
MPHHDVQAKRNFKLVIEYDGSKYHGWQRQQGALTIQEVLESCLEVMLQTSVRAKASGRTDAGVHARGQVVSFACRTRLRPGDIHRGLNSLLPPDIVVLTADEMPDSFHARFSASSKTYAYRILNRPVPSALERGFSWHIPQPLCLSEMLDCLRILEGDHDFAAFMASGSSVTSTRRRMIRADLERPDEDHLVFHFEANGFLRHMVRTLVGTVVAVGRRKLTPPGFRAILESKDRRKAGMTAPAHGLYLVCVNYDEEVCSPDRQKGSHT*