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LAC_acetylene_scaffold_43724_5

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: comp(4122..5093)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 310.0
  • Bit_score: 295
  • Evalue 8.60e-77
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JPK5_TRESO similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 309.0
  • Bit_score: 272
  • Evalue 4.30e-70
ribosomal RNA small subunit methyltransferase H similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 318.0
  • Bit_score: 270
  • Evalue 6.00e-70

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Taxonomy

Spirochaeta sp. JC230 → Spirochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 972
ATGCCGGGAACACCTGGGCAGGAAAAATCGGACAAGCCCGTCATACTCCACACCCCCGTGATGCTCGCGGAAATACTCGAACTCTTCGATATGCTGGGAAAGACGGACACCCTCGTCCTCGACTGCACCCTCGGGGCGGGCGGCCACGCCGAAGCCCTGCTTTCCAGGTCGCCGGCCCTGCGCTATGTCGGGATCGACGCCGACCCCGAAGCCAGGGAACGTTCGGCCGCCCGCCTCGGGACTTTTCGCGACAGGCTGGACATACGCGCCGGCTATTTCGACGAAGTGCTCGCTTCCTGGGCATCGATGCCCTCCTTCGACAAACCCGATTTCATACTTTTCGACCTGGGCGTATCGACGCACCATTACCTCGATTCGGGCCGGGGTTTTTCCTTCGCGAACGACGAGACCCTCGACATGCGCTTTTCCCCCGACGCCGATACGTCGGCGGCCGACCTCGTCAACAGGCTCAAGGAAAGCGATCTCGCCGACCTCATCTACAACTACGGCGAGGAACGCTATTCCAGGCGTATCGCGAGGGCGATCGTCGAGGCGAGGAAGAACGCGCCGATCAGGACTTCGGGAGCCCTGGCGTCCATCGTGACGGGCGCCGTGCCTTCCCAGTACAGGCACGGGAGGATCCATCCCGCCACCCGAACCTTCCAGGCCCTGCGCATCAAGGTGAACAACGAACTCGAGAGGGAAGAGAAGGGCCTTTCCCTCGCGGCGCAGATACTGGCGCCGGGGGGTATCCTGGCCGTCATTTCCTTCCATTCCCTGGAAGACCGCATCGCGAAGCTGCTCTGTCGCGAATACGGCAGGAACAGGGGCTGGCAGGACATCTACAAGACGCCCCGCATCCCGACGGAAGAGGAATGTTCCGCGAATCCGCCTTCGCGCTCGGCGAAGCTGAGAGCCCTTCGTTCCCCGGTCCAGCCCGTTTCGAACGGATGGGAAGGGGACAAAGCATGA
PROTEIN sequence
Length: 324
MPGTPGQEKSDKPVILHTPVMLAEILELFDMLGKTDTLVLDCTLGAGGHAEALLSRSPALRYVGIDADPEARERSAARLGTFRDRLDIRAGYFDEVLASWASMPSFDKPDFILFDLGVSTHHYLDSGRGFSFANDETLDMRFSPDADTSAADLVNRLKESDLADLIYNYGEERYSRRIARAIVEARKNAPIRTSGALASIVTGAVPSQYRHGRIHPATRTFQALRIKVNNELEREEKGLSLAAQILAPGGILAVISFHSLEDRIAKLLCREYGRNRGWQDIYKTPRIPTEEECSANPPSRSAKLRALRSPVQPVSNGWEGDKA*