ggKbase home page

LAC_acetylene_scaffold_49777_3

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: comp(1070..4288)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' id=3014143 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 1078.0
  • Bit_score: 1595
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 1055.0
  • Bit_score: 1526
  • Evalue 0.0
Tax=GWB1_Spirochaetes_60_80_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 1078.0
  • Bit_score: 1595
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_60_80_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 3219
GAAAAGGACGTCGTCTACAACATCAAGAAAGCCAAGATGCTCGTCGAATCGGAGACTCCCGAAGTCTTTGCCGTCCTGGACGAGGTCGTCAAGGAACATCCCGTCCTCCTGAACCGCGCGCCGACCCTTCACCGACTCGGAATCCAGGCCTTCGAGCCGGTCCTGGTCGAAGGCAAGGCCATCAAGCTCCACCCCCTCGTCTGCAAGGCTTTCAACGCCGACTTCGACGGGGACCAGATGGCCGTACACGTTCCCCTCACCAACGCGGCCCAGTCCGAGTGCTGGACCCTCATGCTTTCGAGCCGCAACCTCCTCGACCCCGCCAACGGGAAAACCATAGTCTATCCCTCGCAAGACATAGTATTGGGCATCAACTTTCTGACGAGACCCAAAAAGGGTGTCCTGGGTGAAGGCAAGCGCTTCTCCTCGCCCGAGGAACTCCTCATGGCCTGCGAATCTGGAGCCTGCGACTACCAGGCCGAAGTGAGAGTACCGGCCACCAAGGGAATTGTCTGGGGCAAAGTAGGTGAAGCTCAGGATCTTCTCGCCAACGGCACGATCATGACGACTGCGGGTCGCATCCTCCTCAACGAGGCTCTGCCCGCCCAGGTTCCCTACGTCAACTACTCCCTCACCGACAAGGATATCCGCAGCCTCATCGAGCACGTCTACAAGTTCAACGGCCCTTACATCACCGTGATTATGCTCGATGCAATCAAGAATATGGGCTTCCGCTACGCTACCTTCTTCGGCGCCACCATCGGCATGGACGACATTGTCATCCCGACCGAGAAGGCCAAGATGATCGAGGATGCCAACAAGCAGGTGGACTCCATCCAGAAGCAGTATCTCGCGGGCCACATCACCCAGGACGAGCGCTACAACCGAGTCGTCGAGGTCTGGTCCAAGACCAACGAGGAATTGACGGCGGTGATGATGAAGACCCTGGAGAAGGACAAGGACGGCTTCAACAATATCTATATGATGGCCTATTCCGGCGCGCGAGGAAGCCGCAACCAGATCCGCCAGCTGGCGGGCATGCGCGGCCTCATGGCCAAGCCATCGGGCGACATCATCGAGCTCCCGATCAGGTCGAACTTCCGCGAAGGCCTTTCGGTCATCGAATTCTTCATATCGACGAACGGCGCCAGAAAGGGTCTCGCCGACACGGCGCTCAAGACGGCGGACGCGGGCTACCTCACCCGAAGGCTTGTCGACATCGCCCAGGACATGGTCGTCAACGACGACGACTGCGGCACCATCAACGGAGCAGTCCACATCGCCATCAAGGACGGCGAGGAAATCATCGAGCCTCTGCGCGAGCGCATCATCGGCCGCTTCACTCTCGACCCGATCCGTCATCCCATCACCGCCGAAGCCATCGTCGACTCGAACGAGGAGATAACCGAGGAAATTGCCCTGGCCATCGAAGCTGCCGGCATCGAGGAAGTGACAATCAGGACTGTCCTCACCTGCGAAGCCCGTTACGGTGTGTGTCGCAAGTGCTACGGCCGCAACCTGGCCACGGGCAGGACGGTGGACATCGGCGAGGCTGTCGGTATCATAGCCGCCCAGTCCATCGGCCAGCCGGGTACCCAGCTGACGATGCGTACCTTCCATATCGGCGGTGCGGCGACAAGAGCTTCCGAGGAAAATCGCATCTACCTCAAGTATCCCGTCATCATCACGAAGATCCAGGGCACCTACGTCACGACCAAGGAAGGCCGGTTCCTCTTCACGAGGAAGGGCTATCTCTATGTCTGCAAGATCTTCTCCGCCTTCGATCTCGTCAAGGGAGACAAGGTCCTCGTCGAAGACGGCGCCCGCGTTCTCAAGACTTCGGCCATCATCAGGAAGTCGAACAAGACGGAAATCCTCGCCACCGACATTTCCTATGCCAAGCTCATACCGGGGAAGCTCCTCCTCATCGCACAGGAACAGAAACTGGAGATAAGGAACGGATCCGAGCTCACCGTCCACGAGGGCCAGATGGCCATCGCGAACGAAACCCTGGCCACATTCGACCCCTTCGCCGATCCGATAATTTCGGAGTACGACGGCTATGCCCGCTTCGAGGACATCATCCCTGGCTCGACCCTCAAGGAAGAGATCAACGAGGAAACGGGAAATATCGACAAGAAGATCACGGAGTTCGCGGCCGAACGGGATTCCAAGCAGCCGCGCATCATCATCACGGATGAGGCGGGCAACGAAATCTTCGCCTACCTCTTGCCCGGCGGAGCCTACCTCAATGTCGAGGACGGCGAGATCATCAAGTCGGGCCGCACCCTGGCCAAGATCCTCAAGGAAAGCGCCAAGGCCATGGACATCACCGGCGGTCTTCCCAGGGTCGGCGAACTCTTCGAGGCGCGTAAGCCCAAGAACCCCGCCATCCTGGCCATGGTTTCCGGCAAGGTATTCATCAAGGGCAACGTCAAGAACAAGCGCGTCATCGTGGTGACGGACCGATTCGGCAAGGAATACAAGCATCTCGTACCGATGGGCAGGCGCCTTCTCGTCCGCGACAACGACCAGGTCGAAGCCGGCGAACTTCTCTGCGACGGCAACAGGAACCCGCACGATATCCTCAACATCCTCGGCGAGCAGGCCTGCCAGGCATACCTCATGGACGAAGTCCAGCAGGTGTACAGGCTCCAGGGCGTCACGATCAACGACAAGCACATCGGCGTAATCATCCGCCAAATGATGAAGAAAGTGGAAATCGTCAGCCCCGGCGACACGCGCTTCATCTACGGACAGCAGGTGGACAAGTATAGGTTCCATGAGGAAAACGACAGGGTCATCAAGGAAGGCGGCCAGTCCGCGGTGGCGCGCCCGATGCTCCTCGGCATCACGAGGGCTTCGCTCAAGATCGACTCCTTCTTTTCGGCGGCATCCTTCCAGGAGACGACGAAAGTCCTGACCGACGCGGCGATAGCCGGTTCCGTCGACAGCCTGCGCGGCCTGAAGGAAAACGTCATCATCGGACACCTGATCCCGGCCGGCACGGGCATGAGGATCTATAAGAACATCAAGCTTTCAGACGGCGAGCACGAGGATCTGGACGGTTTTGTCGAGGAGATTCTCGAGAAGCGCAAGCTGGAGAAGGAAATGGCGCCGATTCCCGCGCTCGAGGACAGGGCCGATTCGTCGGCGGCCTTCGAGGAGGAAACGGTGTTCGAGAACGACCCGGGTTTCGAGGCAGTCACCGAGGAGTGA
PROTEIN sequence
Length: 1073
EKDVVYNIKKAKMLVESETPEVFAVLDEVVKEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCKAFNADFDGDQMAVHVPLTNAAQSECWTLMLSSRNLLDPANGKTIVYPSQDIVLGINFLTRPKKGVLGEGKRFSSPEELLMACESGACDYQAEVRVPATKGIVWGKVGEAQDLLANGTIMTTAGRILLNEALPAQVPYVNYSLTDKDIRSLIEHVYKFNGPYITVIMLDAIKNMGFRYATFFGATIGMDDIVIPTEKAKMIEDANKQVDSIQKQYLAGHITQDERYNRVVEVWSKTNEELTAVMMKTLEKDKDGFNNIYMMAYSGARGSRNQIRQLAGMRGLMAKPSGDIIELPIRSNFREGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDMVVNDDDCGTINGAVHIAIKDGEEIIEPLRERIIGRFTLDPIRHPITAEAIVDSNEEITEEIALAIEAAGIEEVTIRTVLTCEARYGVCRKCYGRNLATGRTVDIGEAVGIIAAQSIGQPGTQLTMRTFHIGGAATRASEENRIYLKYPVIITKIQGTYVTTKEGRFLFTRKGYLYVCKIFSAFDLVKGDKVLVEDGARVLKTSAIIRKSNKTEILATDISYAKLIPGKLLLIAQEQKLEIRNGSELTVHEGQMAIANETLATFDPFADPIISEYDGYARFEDIIPGSTLKEEINEETGNIDKKITEFAAERDSKQPRIIITDEAGNEIFAYLLPGGAYLNVEDGEIIKSGRTLAKILKESAKAMDITGGLPRVGELFEARKPKNPAILAMVSGKVFIKGNVKNKRVIVVTDRFGKEYKHLVPMGRRLLVRDNDQVEAGELLCDGNRNPHDILNILGEQACQAYLMDEVQQVYRLQGVTINDKHIGVIIRQMMKKVEIVSPGDTRFIYGQQVDKYRFHEENDRVIKEGGQSAVARPMLLGITRASLKIDSFFSAASFQETTKVLTDAAIAGSVDSLRGLKENVIIGHLIPAGTGMRIYKNIKLSDGEHEDLDGFVEEILEKRKLEKEMAPIPALEDRADSSAAFEEETVFENDPGFEAVTEE*