ggKbase home page

LAC_acetylene_scaffold_65438_5

Organism: LAC_acetylene_Spirochaete_61_14

near complete RP 43 / 55 BSCG 47 / 51 ASCG 15 / 38 MC: 1
Location: comp(3747..4379)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 126.0
  • Bit_score: 154
  • Evalue 1.50e-34
Ribonuclease VapC n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYS0_SPICH similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 126.0
  • Bit_score: 154
  • Evalue 1.10e-34
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 126.0
  • Bit_score: 154
  • Evalue 3.10e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Treponema caldarium → Treponema → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 633
ATGGCTATGAGCATTCGGAATCCGATGGTCGAGCGAATGGCCCGCGAGCTTGCGAAACGCAAGGGTGCCACGATGACCGAAGCGATCGCGGATGCGCTCGAAGCCAGCCTCGCCAGCCAGGATGAAGCATGCGCGCCTCGCCGGGCTGTCCTGGCGGAAATAGCGGCCGAATGCGCGGGCTTGCCCGACTTGGACAAACGCAGCGCTGATGAAATTCTCGGCTACGGAGAAACGGGAGGTTTGCCGATGGTTATCGATAGTTCGGCTCTGCTTGCCGTTCTTTTCGGGTTACCAGAGGCCGAGGATAATGTCAGGGCGCTGGCCTCCTCGGGACGAAAATTCAAGAGCGCGGTGAACAAACTTGAAACCATGATTGTCGTGGAAGCGCGAAAGGGCATGGTGGGTACTGGGGTCTTGGCGAGATTATTGACGATGGCCGGGATGGAGATCATCCCCTTCGATTCGAGCCAGGCCGAGATAGCCATGGCCGCCTGGCGCCGCTACGGGAAAGGAAGGCATCCTGCCGGACTCGACCTGGGCGATTGCGCGGCCTATGCGCTGGCATCCACGTTGAACGATTCCCTACTTTTCAAGGGCGGGGATTTTTCGGAGACGGACGCGATCCCGGCGTGA
PROTEIN sequence
Length: 211
MAMSIRNPMVERMARELAKRKGATMTEAIADALEASLASQDEACAPRRAVLAEIAAECAGLPDLDKRSADEILGYGETGGLPMVIDSSALLAVLFGLPEAEDNVRALASSGRKFKSAVNKLETMIVVEARKGMVGTGVLARLLTMAGMEIIPFDSSQAEIAMAAWRRYGKGRHPAGLDLGDCAAYALASTLNDSLLFKGGDFSETDAIPA*