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LAC_acetylene_scaffold_5390_4

Organism: LAC_acetylene_BJP_IG2103_Bacteroidetes_37_22_48_12

partial RP 26 / 55 BSCG 31 / 51 ASCG 11 / 38 MC: 1
Location: comp(2171..2749)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=3915336 bin=GWF2_Bacteroidetes_41_31 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 187.0
  • Bit_score: 141
  • Evalue 5.20e-31
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 181.0
  • Bit_score: 136
  • Evalue 6.20e-30
Tax=GWF2_Bacteroidetes_41_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 187.0
  • Bit_score: 141
  • Evalue 7.30e-31

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Taxonomy

GWF2_Bacteroidetes_41_31_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGTCTTCGAGTAAACAGCTTACGGATCACGAAACAGAAAGATTGATTGAAGCATGCAGGAAGCAGAGCCGCGAAGCACAATGCGCCCTTTACACCAAATACTGCAAGGCCATGTATAATGTTGCCCTGCGCATCTCGGGAAACAGGCAGGAAGCAGAGGACGTAATGCAGGAAGCATTTATTACCGCTTTCGAAAAGCTTCATACCTATGATGGCAAAGCAAGTTTCGGCAGCTGGTTAAAGAAAATCGTTCTGCATAAGGCCATCGATCAATCCAGGAAACACAAAAAAATGATCTTCGATGATGTGGATGAACTGAATGTTCAACTGGCTGATGAAGACAATGACCTTCCGCCGTATTTTAACCTGACCATTGATGCAGTATACAGCATCTTGCAGTCGCTCAAGCCCCAGTATCGCATCATTCTGAACCTGCGTCTCATAGAAGAGTGCTCCTATGAAGATATTGCAAAGTTGCTCGACCTTCAATATGGTGCAGTAAGAACACGATATGCCAGGGCACGCAGTATATTGGCCGGCAAGATTTATCAGGAGGCACAATCTAGCATGTTGAATTAA
PROTEIN sequence
Length: 193
MSSSKQLTDHETERLIEACRKQSREAQCALYTKYCKAMYNVALRISGNRQEAEDVMQEAFITAFEKLHTYDGKASFGSWLKKIVLHKAIDQSRKHKKMIFDDVDELNVQLADEDNDLPPYFNLTIDAVYSILQSLKPQYRIILNLRLIEECSYEDIAKLLDLQYGAVRTRYARARSILAGKIYQEAQSSMLN*