ggKbase home page

LAC_acetylene_scaffold_6059_2

Organism: LAC_acetylene_Desulfovibrio_69_12

partial RP 36 / 55 BSCG 40 / 51 ASCG 10 / 38
Location: 1173..1676

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01032}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01032};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01032}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 164.0
  • Bit_score: 249
  • Evalue 2.80e-63
3-isopropylmalate dehydratase small subunit n=1 Tax=Desulfovibrio longus RepID=UPI0003B42981 similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 164.0
  • Bit_score: 253
  • Evalue 1.40e-64
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 164.0
  • Bit_score: 249
  • Evalue 5.70e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio alaskensis → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGACCTATCGCGGCAAAGCCCACAAGGTGGGCGCGAACATCGATACCGACGCCATCATCCCGGCCCGGTTCCTGGTGACCACCGATCCGAAGGAACTGGGCGCCAACTGCATGGAGGGCCTGGAGGCCGGCTGGATATCCCGGGTCGCACCCGGGGACATCATGGTGGGCGGCCCCAACTTCGGCTGCGGCTCCTCCCGGGAGCACGCCCCCATCGCCCTCAAGGGCGCGGGAATCCCGGTGGTGGTGGCCCATTCCTTTGCCCGCATCTTCTACCGCAACGGCTTCAACATGGGACTCATCCTGGTGGAGGTCGGGGACGCGGTGGACAAGCTGGGCGACGGGCACGACCTGGAGGTGGACACCCTGGCCGGCCGGATCGTGAACCACAGCACGGGCGAGACCATCCAGTGCATGCCGGTGCCCCCCTTCATGGCCGAGATCCTGGCGGCCGGGGGCCTGGTGGGCTATGCCAAGGCGCGGTTGGCCGCGCAGCAGGGGTAG
PROTEIN sequence
Length: 168
MTYRGKAHKVGANIDTDAIIPARFLVTTDPKELGANCMEGLEAGWISRVAPGDIMVGGPNFGCGSSREHAPIALKGAGIPVVVAHSFARIFYRNGFNMGLILVEVGDAVDKLGDGHDLEVDTLAGRIVNHSTGETIQCMPVPPFMAEILAAGGLVGYAKARLAAQQG*