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SCN18_25_1_16_R1_B_scaffold_1384_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1185..2492

Top 3 Functional Annotations

Value Algorithm Source
Multidrug efflux system inner membrane protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UWW1_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 411.0
  • Bit_score: 468
  • Evalue 4.20e-129
RND efflux system, membrane fusion protein CmeA similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 440.0
  • Bit_score: 744
  • Evalue 1.10e-212
RND efflux system, membrane fusion protein CmeA {ECO:0000313|EMBL:CDM24411.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 440.0
  • Bit_score: 744
  • Evalue 5.60e-212

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGGCCTTTAATCGACTGTCCGCCGGCCGGGCCCTGCGACCGCTGGCGCTGGTGTCGCTGCTGACCCTGGCCGCCTGCTCGGGCGAGCCTCAGCAGGGGATGGAAGGCATGAAAGTCCCGGTCAGCGTGATCCAGGTCCAGCCCCAGGCCGCGGTCGTCAACACGGAACTTCCGGGCCGCGTGCAGGCGATTGAGGACGCCGAGATTCGCGCCCGGGTCAACGGCATCGTCCAGTCCATCGACTTCGAGCAGGGCAGCACGGTCAAGGCCGGCCAGCTGCTGTTCACCATCGATCCCGCCCCATACCGGGCGGCTCGCGACCAGGCCGCCGCGCAGCTGAAGAACGCCCAGGCCTCGGCGCACACCGCGCGCCTGCTGGCGCAGCGTTACACCGCGCTCATCAAGCAGCACGCGGTCAGCCAGCAGGACTACGACAACGCCGTCGCCCAGGCGCGCCAGGCGGACGCCGCGGTCGCCGCCGCCCAGGCCGCCCTGGAAGCGGCGCAGATCGATCTGGACTACACCCGGGTCACCTCGCCCATCGACGGCCGCATCGGCAAGGCCCAGGTCACCGTGGGCGCGCTGGTCAGCGCCACGTCCGCCACCTCGCTGGCGACCGTGCACCGCCTGGACCAGGTCTACGTGGACATCACCCAGCCGGTGGCGCAGATCGCCACCCTGCGCCGCCAGATGGCCGACGGCATCGTCAAGCCGGACGCCAACGGCGACGCGCGGGCCGAAGTCCTGCTGGACGGCGGCACCGCCTACCGCCATCCCGGCAAGCTGCTGTTCTCGGGCGTGGCCGTGGATCCCGGCACGGGGCAGGTGAACCTGCGGGCGCTGTTCCCCAATCCGGAACAGATCCTGCTGCCCGGCCTGTACGTGCGCGTGCGCCTGATCCAGGGCGTGGACCAGCAGGCCCTGGTGGTGCCCGAGCAGGCCATCCAGCGCACCGCCGACGGCAACAGCACGGTCGTCCTGATCAAGGACGGCAAGGCCACCTTCACGCCGGTCCAGGTCGGCCCGCACACCGACAATGGCTACATCATCTACCAGGGCATCCAGGCGGGCGATCAACTGATGGTCGAGGGCTTCCAGAAGGTCCGTCCCGGCGCGCCCGTCCAGCCCATGCCCTGGAAGGGCCAGGGCCAGGCCCAGGGCGGTCCGGCGGGGCAGGGCGCCGCGCAGCCGCCCGCCGCGGGCGGCCAGCCCGGCGCTGAAAAGCCCGCCGGCGACAAACCCGCCGGTGACAAATCCGCTGGCGACAAGCCCGCCGACGGCCAGGCCGCGCCAGGCAAGGCCCACTGA
PROTEIN sequence
Length: 436
MAFNRLSAGRALRPLALVSLLTLAACSGEPQQGMEGMKVPVSVIQVQPQAAVVNTELPGRVQAIEDAEIRARVNGIVQSIDFEQGSTVKAGQLLFTIDPAPYRAARDQAAAQLKNAQASAHTARLLAQRYTALIKQHAVSQQDYDNAVAQARQADAAVAAAQAALEAAQIDLDYTRVTSPIDGRIGKAQVTVGALVSATSATSLATVHRLDQVYVDITQPVAQIATLRRQMADGIVKPDANGDARAEVLLDGGTAYRHPGKLLFSGVAVDPGTGQVNLRALFPNPEQILLPGLYVRVRLIQGVDQQALVVPEQAIQRTADGNSTVVLIKDGKATFTPVQVGPHTDNGYIIYQGIQAGDQLMVEGFQKVRPGAPVQPMPWKGQGQAQGGPAGQGAAQPPAAGGQPGAEKPAGDKPAGDKSAGDKPADGQAAPGKAH*