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SCN18_25_1_16_R1_B_scaffold_1384_5

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 5704..7137

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRZ6_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 493.0
  • Bit_score: 579
  • Evalue 2.40e-162
RND efflux system, outer membrane lipoprotein CmeC similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 488.0
  • Bit_score: 850
  • Evalue 1.60e-244
RND efflux system, outer membrane lipoprotein CmeC {ECO:0000313|EMBL:CDM24413.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 488.0
  • Bit_score: 850
  • Evalue 7.90e-244

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGACGACCCGACGACTATCTGCGCGTGTCCTGGCCGTCTCCACGCTCGGCCTGGCGCTGGGCGCCTGCTCGCTGGCGCCCACCTACCACCGGCCGGACGCGCCGGTGCCCGACCGCTTCCCGGTCACGGCCGCCGACGCCGGACAGGCTGCGGCGCTGCCGGCCTGGCGGGATTTCTTCCAGGATCCCCGCCTGCAGGCTCTGATCGAACTGGCGCTGAAGAACAACCGCGACCTGCGCATCGCCGTCGACCGGGTCGAAGAGGCCCGCGCCCAGTTCGGCATCGCCCAGAGCGACCGCCTGCCGACCATCGGCGCGCAGGGCACGGGGCAGGTCACCCGCACGCCGCCCGACATGCGCAACGGCGGCGCCGATGCCCAATCCGTCAACCGCAGCTACATCGCGGGCGTGGGCATGACGGCCTTCGAGCTGGACTTCTTCGGCCGCGTGCGCAATCTCAGCGAAGCCGCCTACCAGTCCTACCTGTCCACCGACCAGGCGCGCCGCACCGTCCAGTTGGGGCTCATCGCCCAGACCGCCGAGGCCTACTTCCGCCTGCGTTCGGCCCAGGTCCTGCACGAGCTGATGGACAAGACCCTGGAAGCCCGCAAGGGCACGCTGGACCTGGTCCAGTCCCGCTTCGACGTGGGGGTCGCCTCCGACCTGGACCTGGCCCAGGCCCAGTCCCAGTACGACACCGTGCGCGCCGACCGCATCGCGGCCGAGCGCGCGATGACGCAGGCCGGCAACGCCTTGCAGCTGCTCCTGGGCACGCCGGTGCCCGACGGCCTGCCCGAGCCCCGGCCGTTCGGCCGCGAGCAGCTGCTGCAGTCGCTGCCCGCGGGCCTGCCGTCGCAATTGCTTGAACGCCGCCCCGTCATCGTCGGCGCGGAGCACGACCTGATGGCGGCCAATGCCCAGATCGGCGCCGCCCGCGCGGCCTTCTTCCCGCGCATTTCCCTGACCGGACTGCTGGGCTTCGCCAGCCCGGAACTCGACGCCCTGTTCGGCGGCAGCCACCGCTACTGGCAGTTTTCGCCCCAGATCCAGATGCCGCTGTTCTCGGGCGGCGTCAAGGGCAATCTGGACCTGGCCAAGGCGCGCAGCAACATCGCCGTGTCGGCCTACGAGAAAGCCATCCAGACCGCGTTCCGCGAGGTCGCCGACGGCCTGGCGGGCGAAGCCACCTACAGCAACCAGCTCGACGCCCTGCGCGCCACCGAGGAATCCGCGCTCAAGGCCCTCAAGCTGGCCCAGATCCGCTACGAGACCGGCGTGGACAGCTTCCTGCAGGTTCAATCCGCGCAGGTCGCCTTGTACGGCGTGCAGCAGCAGTTCATCCAGCTGGGTACCGACGCGCTGTTCAACCGCGTCGAACTGTACAAGGCGCTGGGCGGGGGCTGGTCGGCGGACGACCTGCCGGGGGCGTCCTGA
PROTEIN sequence
Length: 478
MTTRRLSARVLAVSTLGLALGACSLAPTYHRPDAPVPDRFPVTAADAGQAAALPAWRDFFQDPRLQALIELALKNNRDLRIAVDRVEEARAQFGIAQSDRLPTIGAQGTGQVTRTPPDMRNGGADAQSVNRSYIAGVGMTAFELDFFGRVRNLSEAAYQSYLSTDQARRTVQLGLIAQTAEAYFRLRSAQVLHELMDKTLEARKGTLDLVQSRFDVGVASDLDLAQAQSQYDTVRADRIAAERAMTQAGNALQLLLGTPVPDGLPEPRPFGREQLLQSLPAGLPSQLLERRPVIVGAEHDLMAANAQIGAARAAFFPRISLTGLLGFASPELDALFGGSHRYWQFSPQIQMPLFSGGVKGNLDLAKARSNIAVSAYEKAIQTAFREVADGLAGEATYSNQLDALRATEESALKALKLAQIRYETGVDSFLQVQSAQVALYGVQQQFIQLGTDALFNRVELYKALGGGWSADDLPGAS*