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SCN18_25_1_16_R1_B_scaffold_1839_8

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 5866..6336

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 155.0
  • Bit_score: 303
  • Evalue 1.20e-79
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FA90_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 156.0
  • Bit_score: 231
  • Evalue 3.10e-58
LSU m3Psi1915 methyltransferase RlmH similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 155.0
  • Bit_score: 303
  • Evalue 2.40e-80

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGAAACTCCTGGTCTACGCCGTCGGCACCCGCATGCCGTCCTGGGTCCAGACGGCCTGGCAGGACTTCGCCAAGCGCATGCCCCGCGACTGCGCCCTGGAACTGCACGAAATCCGTCCCGAACCCCGCGCCAGCGGCAAGACCGCCCAGCAGCTGATGCACGCCGAGGCCCAGCGCATCGAGGCCGCCGTGCCCGCGCAGGCTTGGCGCGTCATCCTGGACGAGCACGGCCGCGACCTGACGACGCGGGACCTGGCGGGCCATCTCGAAACCTGGCGGGCCAGCGGCGGCGACGTCGCCTTCGTCATCGGCGGCCCCGACGGGCTGGATCCGGCCCTGAAGCAGACCGCCCGCCAGACCCTGCGCCTGTCCTCGCTGACCCTGCCCCACCCCATGGTCCGCATCCTGCTGGCCGAGCAGCTCTACCGCGCCTGGACGATCCTGGCGGGCCACCCCTACCACCGCGCCTGA
PROTEIN sequence
Length: 157
MKLLVYAVGTRMPSWVQTAWQDFAKRMPRDCALELHEIRPEPRASGKTAQQLMHAEAQRIEAAVPAQAWRVILDEHGRDLTTRDLAGHLETWRASGGDVAFVIGGPDGLDPALKQTARQTLRLSSLTLPHPMVRILLAEQLYRAWTILAGHPYHRA*