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SCN18_25_1_16_R1_B_scaffold_1867_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1970..3058)

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic solute-binding protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WKH1_BORBR similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 362.0
  • Bit_score: 610
  • Evalue 5.70e-172
TRAP transporter solute receptor similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 362.0
  • Bit_score: 726
  • Evalue 2.60e-207
TRAP transporter solute receptor {ECO:0000313|EMBL:CDM23084.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 362.0
  • Bit_score: 726
  • Evalue 1.30e-206

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGCAACGTCGTTCCTTCCTCAAGAAGGCTGCCCTCGGCGCGGCCGCTGGCGGCGCCACCCTGGCCGCTCCCGCTTTCGCCCAGGAATCCCCCGCCATCTCCTGGCGCCTGGCCTCCAGCTTCCCACGCAGCGCCGACGCCATCTACTCGGGCGGCGAAAACATCGCCAAGTTCGTGTCCGAGGCGACCGGTGGCAAGTTCCAGATCCGCGCCTTCCCCGGCGGCGAGATCCTGCCCGCCCTGGGCGTGCTCGACGGCGTGCAGAACGGCACGGTCGAATGCGGCCATACCGCGTCTTACTACTACTACGGCAAGGACCCGGCCCTGTGCTTCGACGGCGCCGTGCCCTTCGGCCTGAACACCCGCCAGTACAACGCCTGGATGCGCCACGGCGATGGCATGAAGCTCCTGCGCGAACTGTTCGCCAAGTTCAACATCGTCAACTTCCCCTGCGGCTACACCGGCACCCAGATGGGCGGCTGGTTCCGCAAGGAAGTCAAGACGGTCGAAGACCTCAAGGGCCTGAAATTCCGCACGGCGGCCTTCGCCGGCGCGGTGCTGATGAAGCTCGGCGTGGTGCCGCAGCAGATCGCCGGCGGCGACATCTATCCGTCCCTGGAAAAGGGCACCATCGACGCGGCCGAGTGGATCGGACCCTACGACGACGAGAAGCTCGGCTTCCATCGCGTGGCGCCGTTCTACTACTTCCCCGGCTGGTGGGAAGGCACGCTGCAGGTGTCCCTGTACGTGAACAAGGACAAGTACGAAGCCCTGCCCAAGCACTACCAGGCCGTGCTCGACCAGGCCTCCGCCCTGGCGACCAACACCATGATCGCCACCTACGACGCGGAAAACCCGAACGCCCTCAAGCGCCTGATCGCCGAAGGCGCCAAGCTGCGCGCCTTCCCGAAGCCCGTCATGGACGCCTGCTACAAGGCCGCCCAGGAAACCTATGCGGAACTGTCCGCCAAGGATCCCGGCTTCAAGAAGATCCACGACGCCTACATGGGCTTCCGCGACCATGAAATCCCGTGGTTCCGGATCGCCGAAGGCAGCTTCGACCAATACATGGCCACGGCGGCCAAGTAA
PROTEIN sequence
Length: 363
MQRRSFLKKAALGAAAGGATLAAPAFAQESPAISWRLASSFPRSADAIYSGGENIAKFVSEATGGKFQIRAFPGGEILPALGVLDGVQNGTVECGHTASYYYYGKDPALCFDGAVPFGLNTRQYNAWMRHGDGMKLLRELFAKFNIVNFPCGYTGTQMGGWFRKEVKTVEDLKGLKFRTAAFAGAVLMKLGVVPQQIAGGDIYPSLEKGTIDAAEWIGPYDDEKLGFHRVAPFYYFPGWWEGTLQVSLYVNKDKYEALPKHYQAVLDQASALATNTMIATYDAENPNALKRLIAEGAKLRAFPKPVMDACYKAAQETYAELSAKDPGFKKIHDAYMGFRDHEIPWFRIAEGSFDQYMATAAK*