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SCN18_25_1_16_R1_B_scaffold_2021_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 743..1264

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=3 Tax=Alcaligenes RepID=J0B5L2_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 173.0
  • Bit_score: 322
  • Evalue 1.90e-85
SSU ribosomal protein S5p similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 173.0
  • Bit_score: 336
  • Evalue 2.80e-90
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 173.0
  • Bit_score: 336
  • Evalue 1.40e-89

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGGCTAAAGCACAAGGCAAGCACGCCCCGGAGCAAGAGCGCGACGATGGCATGCGTGAAAAGATGATCGCGGTCAACCGCGTCAGCAAGGTCGTCAAGGGCGGCCGCACCATGAGCTTCGCCGCGCTGACCGTGGTCGGCGACGGCGACGGCCGCATCGGCATGGGCAAGGGCAAGGCCCGCGAAGTGCCGGTCGCCGTCCAGAAGGCCATGGAACAGGCCCGCCGCGGCCTGCTCAAGGTGGCCCTGAAGAACGGCACGCTGCATCACACCGTGGTCGGCAAGCACGGCGCCTCGACGGTGCTGATCTCGCCCGCCGCCGAAGGGACCGGCGTGATCGCCGGCGGCCCGATGCGCGCGATCTTCGAAGTCATGGGCGTGCGCAACGTCGTGGCCAAGAGCCTCGGTTCGAGCAACCCGTACAACATGGTCCGTGCGACCCTCAACGGCCTGCGCGCCTGCTCCACGCCCGCGGAAATCGCGGCCAAGCGCGGCAAGACGGTCGAAGAGATCCTGGGGTAA
PROTEIN sequence
Length: 174
MAKAQGKHAPEQERDDGMREKMIAVNRVSKVVKGGRTMSFAALTVVGDGDGRIGMGKGKAREVPVAVQKAMEQARRGLLKVALKNGTLHHTVVGKHGASTVLISPAAEGTGVIAGGPMRAIFEVMGVRNVVAKSLGSSNPYNMVRATLNGLRACSTPAEIAAKRGKTVEEILG*