ggKbase home page

SCN18_25_1_16_R1_B_scaffold_3120_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(2060..3622)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI00035F2EF5 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 511.0
  • Bit_score: 658
  • Evalue 3.40e-186
Dipeptide-binding ABC transporter, periplasmic substrate-binding component similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 520.0
  • Bit_score: 1011
  • Evalue 7.70e-293
Dipeptide-binding ABC transporter, periplasmic substrate-binding component {ECO:0000313|EMBL:CDM26067.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 520.0
  • Bit_score: 1011
  • Evalue 3.80e-292

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGCAATCCACGATTCGAGCGGGAATCCGCCGCGCCCTGGTGGCGGCGGCGATGGGCGCGGGGGCCTGTCTCCTGGCGGGCGGCGCGCTCGCGGCGACGCCGGCCGATACGCTGGTGATCGGCAAGCCGGCCGACCCCCAGACGCTGGACCCGGCCGTCACGATTGACAACAACGACTGGACCGTCACCTATCCGGCCTACCAGCGCCTGATGCGTTACAAGCAGGTCGATGGCCATGGCTCGACCGAGGTCGAAGGCGACCTGGCGGCCAGCTGGTCGGCCTCGCCGGACAGCCTGGTCTGGACGTTCACCTTGCGCGACGGCCAGAAATTCGCCGACGGCGCGCCCGTGGACGCCCAGGCGGTGAAGCTGTCCTTCGAGCGGCTGCTGGCCAAGAAGCAGGGTCCGTCGGAAGCCTTCCCCGCCGACATGAAGATCGACGCCGTGGATGCGCGCACCGTGCGCTTCACGCTGCAAAAGCCCTTCGCGCCGTTCCTCTACACGCTCGCCAACAATGGCGCGTCCATCGTCAATCCCAAGGCCATGCAACGCGACGACGCCGACGCCTGGCTGTCGGGCCACACGGCGGGCTCCGGCCCCTATCAGTTGGTGTCCTGGCAGAAGGGCCAGTCGCTGGTGCTGGAACGCAATCCGCATTACGCCGGCTCGAAGAAGCCGACGCTGGACAAGTTCGTGGTGAAGATCGTGCCGGAATCTTCCGCGCGCCGCCTGCAACTGCAGAAGGGTGACCTGGACGTGGCCGAGGAACTGCCGGTGGACCAGCTCCAGGCCCTGAAGAAGGACAAGGACGTGCGCGTGGCGGAATTCCCGTCGCTGCGGGTGACCTATCTGTATCTGAACAACGCCAAGGGGCCGTTGCGGGACGTGGATCTGCGCCGCGCCGTGGTGGCCGCGCTGGATTACCAGGGCATCGTGGACGGCATCATGATGGGGCAGGCCAAGCAGATGCGCGGCCCGATCCCCGAAGGCATGTGGGGCCATGACGCCGATCTGCCCCTGCCGAAGCAGGACGTGGCGGCGGCCAAGGCGCTGGTGGAAAAGGCCGGCGGGGTGAAGTCGCCGCTGCTGCTGCGCTATTCCACCCAGGATCCCGCCTGGGAACCCATCGCCCTGACGGTTCAGGCCAATCTCACCGCCGTCGGCGTGCCGGTCAAGCTCGAAAAGCTGGCCAACGCCACGCTGCGCGAGAACCTGGGCCAGGGCAATTTCGACATTTCCATCGGCAACTGGAGCCCGGACTTCGCCGATCCCTACATGTTCACCAGCTACTGGTTCGATTCGGACAAGAAGGGCCTGGCGGGCAACCGGTCCTTCTATTCCAACCCGCAGGTGGACCAGTGGCTGCGCGAGGCCGCCACGCTCAGCGACCAGGACAAGCGCGTGGCGCTCTACAAGCAGGTCCAGGAACAGGTCGTCAAGGACGCGGCCTACGCCTACCTGTACCAGAAGAACTACCAGGCCGGGCTGGGGGCGAACGTCAAGGGCTTCGTCTTCAACCCCATGCTGGAGCGCGTGTTCAACATCGCCGACATGACGAAGTAG
PROTEIN sequence
Length: 521
MQSTIRAGIRRALVAAAMGAGACLLAGGALAATPADTLVIGKPADPQTLDPAVTIDNNDWTVTYPAYQRLMRYKQVDGHGSTEVEGDLAASWSASPDSLVWTFTLRDGQKFADGAPVDAQAVKLSFERLLAKKQGPSEAFPADMKIDAVDARTVRFTLQKPFAPFLYTLANNGASIVNPKAMQRDDADAWLSGHTAGSGPYQLVSWQKGQSLVLERNPHYAGSKKPTLDKFVVKIVPESSARRLQLQKGDLDVAEELPVDQLQALKKDKDVRVAEFPSLRVTYLYLNNAKGPLRDVDLRRAVVAALDYQGIVDGIMMGQAKQMRGPIPEGMWGHDADLPLPKQDVAAAKALVEKAGGVKSPLLLRYSTQDPAWEPIALTVQANLTAVGVPVKLEKLANATLRENLGQGNFDISIGNWSPDFADPYMFTSYWFDSDKKGLAGNRSFYSNPQVDQWLREAATLSDQDKRVALYKQVQEQVVKDAAYAYLYQKNYQAGLGANVKGFVFNPMLERVFNIADMTK*