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SCN18_25_1_16_R1_B_scaffold_3220_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 929..1237

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU11_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 99.0
  • Bit_score: 165
  • Evalue 1.80e-38
Integration host factor alpha subunit similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 199
  • Evalue 3.10e-49
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 199
  • Evalue 1.60e-48

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GTGAATACGGATCGGACGCTCACCAAAGCCCATCTGGCCGAACTGCTGTTCGAGCGCGTGGGCCTGAACAAGCGCGAAGCCAAGGACATCGTGGACACGTTCTTCTCCGAAGTCCGCGACGCCCTGGTGCAGGGCACCGAGGTCAAGCTGTCGGGCTTCGGCAGCTTCCAGGTGCGCAACAAGCCGCCGCGCCCGGGCCGCAATCCCAAGACCGGCGAAGTCATCCCGATCGCCGCGCGCCGGGTGGTCACGTTCCATGCCAGCCAGAAGCTCAAGGACGGCGTGGGCACCGACGGAGACGCCGCATGA
PROTEIN sequence
Length: 103
VNTDRTLTKAHLAELLFERVGLNKREAKDIVDTFFSEVRDALVQGTEVKLSGFGSFQVRNKPPRPGRNPKTGEVIPIAARRVVTFHASQKLKDGVGTDGDAA*