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SCN18_25_1_16_R1_B_scaffold_3220_4

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1735..2208)

Top 3 Functional Annotations

Value Algorithm Source
Anti-sigma-K factor RskA n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SY44_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 118.0
  • Bit_score: 60
  • Evalue 1.60e-06
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 157.0
  • Bit_score: 254
  • Evalue 1.30e-65
Uncharacterized protein {ECO:0000313|EMBL:CDM24268.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 157.0
  • Bit_score: 254
  • Evalue 6.30e-65

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGAAACCCTCTTACTCTTCCTACTCCGACGACGAAATCGCCCGCTACGTGCTGGGCCTGGACATGCCCGACCGCGTGGCGGACATCCAGTCGCGCTTGGCCCATGACGACGCGGCCGCCGCGCGCGCCCTGAAATGGGAAGCCTATTTCCTGGGAATCGTCGACGCCCTGCCCGTCCAGCCGCCGCCCGACGCCGTGCTGGACCGCATCCGCCAGAGTCTGGGGATGGAAATGGAAGAACCGCCCGTCATGGGCGAAGCCCGGATATCCGAGGCCGGTCCGCGTCCCGCGCCCGGCGGCGAGCCGCCGCGCCGCCGCGCCCGGCCAGGAACACGGCTGCGGCGCGGCCGCGTGGCCATGGCGCTGGGAATCGCCGTGGTGCTGTGCCTGGCGGCCCTGGCGCTCTGGGCCAGCCTGCGCCCGGCGCCCGCCGGGACCGTCGTCCAGCATCCCGTCCATCTGGGAAGCCGCTGA
PROTEIN sequence
Length: 158
MKPSYSSYSDDEIARYVLGLDMPDRVADIQSRLAHDDAAAARALKWEAYFLGIVDALPVQPPPDAVLDRIRQSLGMEMEEPPVMGEARISEAGPRPAPGGEPPRRRARPGTRLRRGRVAMALGIAVVLCLAALALWASLRPAPAGTVVQHPVHLGSR*