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SCN18_25_1_16_R1_B_scaffold_3220_5

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(2205..2732)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU06_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 119
  • Evalue 3.30e-24
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 175.0
  • Bit_score: 327
  • Evalue 1.30e-87
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDM24269.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 175.0
  • Bit_score: 327
  • Evalue 6.50e-87

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGACTGTTTCAGTTTTCGATTTCGAAGCGGAATTGAGCGCCTGCGCGGCGGGAGACCGCGCCGCATTCCTGGCGCTGTACCGCCACGAGTCCCCCGCCATGCGCGCCCTGGCGATGGCCATGCTGGACGATCCCGACGCGGCCGACGCGGTGCTGCACGAAACCTTCGTCCTGATCTGGCGCAACGCGGCCGGCTACAGCCCGGCCATCGGCACCGCGCGCGCCTGGATCTACAGCATCCTGCGCTACCGGGCGGCGGCCCATGCGCGGCAGATGCGCGCCGAAGGCCGCCACCCGGCCGAGGACACCCCCCTGCCCCGGCTCGCCCTGCCGCCCGACGCGCCGGCCGGCACGATCGCCGGCGCCCTGGCCACCCTGCCCGCCCCGCAGCTCGACGCCCTGCTGCAGGCCTACCTGCACGGCGGCGATCCGGCCCGCATCGCCGCCCGCCTGGACCGGTCCGAGCCCGACATCGAGGCCTCCCTGGGCGCCGCCCTGGCGCACATCGACGAGGCCGTGCGCGCATGA
PROTEIN sequence
Length: 176
MTVSVFDFEAELSACAAGDRAAFLALYRHESPAMRALAMAMLDDPDAADAVLHETFVLIWRNAAGYSPAIGTARAWIYSILRYRAAAHARQMRAEGRHPAEDTPLPRLALPPDAPAGTIAGALATLPAPQLDALLQAYLHGGDPARIAARLDRSEPDIEASLGAALAHIDEAVRA*