ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1535_8

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 6148..7392

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 414.0
  • Bit_score: 809
  • Evalue 3.50e-232
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CDM25954.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CDM25954.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 414.0
  • Bit_score: 809
  • Evalue 1.70e-231
Serine hydroxymethyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSG0_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 414.0
  • Bit_score: 736
  • Evalue 7.90e-210

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGTTTGACCGTTCCCGCACCCTCGATCAGGCCGACCCGGACATCTGGGCCGCCATCCAGCAGGAAAACGTCCGCCAGGAACAGCACATCGAGCTGATCGCCTCGGAAAACTACGCCAGCCCGGCCGTCATGCAGGCCCAGGGCACGCAACTGACCAACAAGTACGCCGAAGGCTATCCCGGCAAGCGCTACTACGGCGGCTGCGAGTACGTGGACGTGGTCGAACAGCTGGCCATCGACCGCCTGAAGGCGATCTTCGGCGCGGAAGCCGCCAACGTGCAGCCGAACTCCGGCTCCCAGGCCAACCAGGGCGTGTACATGGCCGTGCTCAAGCCGGGCGACACCGTGCTGGGCATGAGCCTGGCCGAAGGCGGCCACCTGACGCACGGTTCGCCGGTGAACGCCTCCGGCAAGCTGTACGACTTCCATTCCTATGGCCTGGACGCCAACGAGGTCCTGGACTACGACAAGCTCGAGGAACTCGCGCGCACCCTCAAGCCCAAGCTGATCGTCGGCGGCGCCTCGGCCTATTCGCTGCACATCGACTTCGAGCGCATGGCGCGCATCGCCCACGACAACGGCGCCCTGTTCATGGTGGACATCGCCCACTACGCGGGCCTGGTGGCCGGCGGCGTCTACCCGAACCCGGTGCCGCACGCCGACTTCGTCACCTCGACCACCCACAAGTCCCTGCGCGGCCCGCGCGGCGGCGTGATCATGATGAAGGCCGAATTCGAGAAAATCGTCAATTCCGCCATCTTCCCCGGCATCCAGGGCGGTCCGCTGATGCACGTCATCGCCGCCAAGGCCGTGGCCTTCGGCGAGGCCCTGCAGCCCGAATTCAAGGCCTATGCCGCCCAGGTGGCCGCCAATGCCCGCGTGCTGGCCGACACCCTGGTCAAGCGCGGCCTGCGCATCGTGTCCGGCCGCACCGAAAGCCACGTGATGCTGGTGGACCTGCGCGCCAAGGGCATCACCGGCAAGGCCGCCGAAGCCGTCCTGGGCCAGGCGCACATCACGGTCAACAAGAACGCCATCCCGAACGATCCGGAAAAGCCCTTCGTCACCAGCGGCATCCGCCTGGGCACGCCGGCCATGACCACGCGCGGCTTCAAGGAAGCCGAGGCGGAACTCACCGGCAACCTGATCGCCGACGTGCTCGACAACCCCGATGATGCCGACAACATCGCCCGGGTGCGCGCGCAGGTCAACGAGCTGACCGCGCGCCTGCCGGTCTATCGCTAA
PROTEIN sequence
Length: 415
MFDRSRTLDQADPDIWAAIQQENVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRLKAIFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMSLAEGGHLTHGSPVNASGKLYDFHSYGLDANEVLDYDKLEELARTLKPKLIVGGASAYSLHIDFERMARIAHDNGALFMVDIAHYAGLVAGGVYPNPVPHADFVTSTTHKSLRGPRGGVIMMKAEFEKIVNSAIFPGIQGGPLMHVIAAKAVAFGEALQPEFKAYAAQVAANARVLADTLVKRGLRIVSGRTESHVMLVDLRAKGITGKAAEAVLGQAHITVNKNAIPNDPEKPFVTSGIRLGTPAMTTRGFKEAEAELTGNLIADVLDNPDDADNIARVRAQVNELTARLPVYR*