ggKbase home page

SCN18_25_1_16_R1_B_scaffold_2504_5

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 2633..4543

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR46_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 646.0
  • Bit_score: 696
  • Evalue 1.80e-197
Outer membrane vitamin B12 receptor BtuB similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 662.0
  • Bit_score: 871
  • Evalue 8.90e-251
Outer membrane vitamin B12 receptor BtuB {ECO:0000313|EMBL:CDM23181.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 662.0
  • Bit_score: 871
  • Evalue 4.40e-250

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1911
ATGTCTGCTTCCTTCCCGCGCCGCCTCGCGGCCGTCTGCTGTCTGTTCCCCCTGGCCGCCACGGCCCAATCCGCCTCCACCGACGCCGCCGTGCCGACACTGCGGGACATCGTCGTCACCGCCAGCCGCAGCCCCGAACCCCTGGCCGACGTGGTGGGCGACGTCACCGTCATCGGCCCGAAACAACTGGCCGAGGCGCGCGGCGACAGCATCGCCGAGATCATTGGACGGGCGCCGGGCGTGCAGTTCACTTCCAATGGCGGCCCGCAAACGGTGACCAGCCTGTTCATGCGCGGCGCGAATTCCGCTCATACGCTGGTGTTGATCGACGGCATGCGGATCAACGGCTCGACCTCGGGTGGCGTGAACTTCCCCGCCATCGACCCGGCCCTGGTGGAGCGCATCGAAATCCTGCGCGGCGCGGCCAGCAGCCTGTATGGCTCGGACGCCATCGGCGGCGTGATCAACATCATCACCAAGAAGGGCGAACAGGACCGTCCCCTGTCCGCCTGGGCGAATGTCGGCTACGGTACCTATGAAACAGCCAAATCCAACCTGGGCCTGTCGGGCGCCGCACAAGGTTGGGATTACAGTTTTTCAGCCAGCGCGGCAGGCAGCAAGGGGTTTGACGCTCAGCGTCCCAGGTACTCCAATGACGTGCCCAACGACATGCATTACCCTGACAAGGACGGCTACCGCAGCCATGCCGTTTCCGGCACCCTCGGGTATCGCTGGGCGGAAGGCCATCACATCGGGTTGAGCGCCTACAACGGCTATACGGATGGGGACTTCGACGCTTCCGGATACGATCCCGTCACGTGGAACAGCTACCCACTGGATAATGTGTACAGCCTGTACCGCCAGCAAGCCTACGCGCTCACCTCCACGGACCGCATCACCGACCAATGGGAAAGTGTCCTGCGCTTCGGCTGGAACAAGGATTCCGTCGAGTCCCGCGACCCGGTATCCACCAACTATACGGCCAGCCAGCGCCGCACATTCTCCTGGCAGAACAACTGGCAATTCCTGCCGCAACACCGCCTGTCCCTGGTGACGGAACGAGTGGAGGAACGCGTCCAGAGCAATACCCGATACGACCAGTCAGACCGGGATACGAACGCCGTGGCGCTGATCTACAAAGGCCGCATCGACCGCTTGCACACCCAGGCCAGCGTGCGCAACGATAACTACACGGGCTATGGCAACCAGACCACCGGCAGCCTGGGGCTGGATTTCGACCTGACGGATGCCTGGCAAGTCGGCGTGGCGGGCAACACAGGATTCCATGCGCCGACGTTCAACGACATGTACTATCCGGGCTCCGTCAACCTGGACCTCAAGCCGGAGAAATCCCGCAACATCGAGGCCCATCTCGCCTACACCGGCGAGCGGACCCAGGCCCGCCTGGCACTATTCCAGAACAAGGTCCGCGACCTGATCGTCTGGGACAACGCCTTGTCCAAATCCAACAATCTGGACAGTGCGACCATCCGCGGAATCACGCTTTCCGGAGAGCACGACTTCGGCAACACCACGCTTCGCGCCAGCGCCGACTTCCTCGATCCGCGTAACGATGATCCGGCCCCCGGCACCAACAGCCAGCTGATCCGCCGTGCCCGCCAGATTTTTCACGTTGGAATCGAGCATCGCATCCAGGCACTGAAACTGGGCGCTGAATACCAGTACACCGGCAACCGGTACGACAATGTCTACAACTCCGCCACATTCAAGACGGAGCAAACCCGCCTGGGCGGCTATTCCCTCGTCAACCTGACCGCCGCCTACGACTTCAGCAAGTCGCTGGGCGTCCAGGTGCGCTGGAACAACGTGCTGGACAAGGACTACGTGCTGGTGGACGGCTACAACACGCCAGGTTCCAACGTGTTCGTGAACCTGTCCTGGCGGATGTAG
PROTEIN sequence
Length: 637
MSASFPRRLAAVCCLFPLAATAQSASTDAAVPTLRDIVVTASRSPEPLADVVGDVTVIGPKQLAEARGDSIAEIIGRAPGVQFTSNGGPQTVTSLFMRGANSAHTLVLIDGMRINGSTSGGVNFPAIDPALVERIEILRGAASSLYGSDAIGGVINIITKKGEQDRPLSAWANVGYGTYETAKSNLGLSGAAQGWDYSFSASAAGSKGFDAQRPRYSNDVPNDMHYPDKDGYRSHAVSGTLGYRWAEGHHIGLSAYNGYTDGDFDASGYDPVTWNSYPLDNVYSLYRQQAYALTSTDRITDQWESVLRFGWNKDSVESRDPVSTNYTASQRRTFSWQNNWQFLPQHRLSLVTERVEERVQSNTRYDQSDRDTNAVALIYKGRIDRLHTQASVRNDNYTGYGNQTTGSLGLDFDLTDAWQVGVAGNTGFHAPTFNDMYYPGSVNLDLKPEKSRNIEAHLAYTGERTQARLALFQNKVRDLIVWDNALSKSNNLDSATIRGITLSGEHDFGNTTLRASADFLDPRNDDPAPGTNSQLIRRARQIFHVGIEHRIQALKLGAEYQYTGNRYDNVYNSATFKTEQTRLGGYSLVNLTAAYDFSKSLGVQVRWNNVLDKDYVLVDGYNTPGSNVFVNLSWRM*