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SCN18_25_1_16_R1_B_scaffold_2505_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(2..322)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XZ84_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 108.0
  • Bit_score: 178
  • Evalue 2.80e-42
Branched-chain amino acid ABC transporter, amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 107.0
  • Bit_score: 214
  • Evalue 9.90e-54
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:CDM24533.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 107.0
  • Bit_score: 214
  • Evalue 4.90e-53

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGAAGTTCAAACTGCGCATCACCCCCTGCATTCTCGCGTTCGGAGCTCTGGCTCTGGCTGCCGGCGCCCATGCCGACACCCTCAAGATCGGCATTCCGCAGCCGATGACCGGCCCCAACACCCAGTACGGCGACCAGATCCAGGCGGGCGCGCTCACGGCCATCGATGCGCTGAACGAAACCGGCGGGATCAAGGGCATGAAGATCGAGCCGCTGCTGATCGACGACGGCTGCGAACCCAAGCAGGCCGTGCCGGCCGCCAACCGCGTGGTCAACGCCGGCGCCAAGTTCGCCGTGGCCCATGCCTGCTCCGGCACCACG
PROTEIN sequence
Length: 107
MKFKLRITPCILAFGALALAAGAHADTLKIGIPQPMTGPNTQYGDQIQAGALTAIDALNETGGIKGMKIEPLLIDDGCEPKQAVPAANRVVNAGAKFAVAHACSGTT