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SCN18_25_1_16_R1_B_scaffold_2180_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1..243

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DNA-directed RNA polymerase subunit alpha-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C192CB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 160
  • Evalue 4.50e-37
50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 160
  • Evalue 1.30e-37
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 160
  • Evalue 6.30e-37

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 243
GCCGAGCCGCTGATCACCCTGGCCAAGGTCGACTCCGTCGCCAACCGCCGTCTGGCCTTCGCCCGTCTGCGCGACAACGAAGCCGTGGGCAACCTGTTCACCATCCTGGGCCCGCGCTACGCGAACCGTCCGGGCGGCTACCTGCGCCTGCTGAAGTGCGGTTTCCGCGCCGGCGACAACGCGCCGATGGCCTACGTCGAGCTGGTTGACCGTCCGGTCGTGGCCGAGGAAGTGGCCGAGTAA
PROTEIN sequence
Length: 81
AEPLITLAKVDSVANRRLAFARLRDNEAVGNLFTILGPRYANRPGGYLRLLKCGFRAGDNAPMAYVELVDRPVVAEEVAE*