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SCN18_25_1_16_R1_B_scaffold_2897_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1525..1899)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IT53_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 116.0
  • Bit_score: 144
  • Evalue 4.00e-32
Probable transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 124.0
  • Bit_score: 246
  • Evalue 2.10e-63
Probable transmembrane protein {ECO:0000313|EMBL:CDM24388.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 124.0
  • Bit_score: 246
  • Evalue 1.00e-62

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGAAAGCGTGGAAATCAAATTCAGCCCGGGCCTGCACGGCCTGGCGTGCGTCTGCCTGTTCGGCCTGATCGTCCTGTGCGTGGGCTGGGAGCTGTGGTGGGCGCCGCTGCGTCCCGGCGGCACGCTGATGGCCCTGAAGGCCGTGCCGCTGCTGTTCGCCGTGAGCGGCGTGCTGCGGCGCCGGCTCTACACCCTGCAATGGGTGTCCATGCTCAGTCTGCTCTACCTGATGGAAGGCGTGGTGCGCGCCTGGTCGGACGTCTCGCCGGTGTCGGCGGCGCTGGCCGGCCTGGAAATCCTCCTTTCGCTGGGCCTGTACCTGGGCGCCATCCTGTACGTGCGTCCCGCCAAGCGGGCGGCGCGCCATGGCTGA
PROTEIN sequence
Length: 125
MESVEIKFSPGLHGLACVCLFGLIVLCVGWELWWAPLRPGGTLMALKAVPLLFAVSGVLRRRLYTLQWVSMLSLLYLMEGVVRAWSDVSPVSAALAGLEILLSLGLYLGAILYVRPAKRAARHG*