ggKbase home page

SCN18_25_1_16_R1_B_scaffold_2900_5

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(4374..4670)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein transmembrane n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FT0_DECAR similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 92.0
  • Bit_score: 82
  • Evalue 1.50e-13
putative lipoprotein transmembrane similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 98.0
  • Bit_score: 187
  • Evalue 1.20e-45
Putative lipoprotein transmembrane {ECO:0000313|EMBL:CDM22594.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 98.0
  • Bit_score: 187
  • Evalue 5.90e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
GACGCGCTGAACGACGGCCTGAAGGCCAACTGCACCGAGGCCGAGCTGAAGGACATGGCCGACACCATCGCCCACTTCGAGGCCTTCATGAAGACCGGCGGCGAGGGCGCCTCGGGCGACCGGGTGGACATCGTTTTCAATCAGGGGACAGTCTCGGTATCATTCAAGGGCAAGGCTCTGGGGGAGGTCAAGGATCCCCGTTTCGCCACCGCGCTCCTGAAGGTCTGGCTGGGCGCCCACCCGGCCCAGGAATCCCTGAAAGCGGCCCTGCTGGGCCAGGAATCCAAAAGCAACTGA
PROTEIN sequence
Length: 99
DALNDGLKANCTEAELKDMADTIAHFEAFMKTGGEGASGDRVDIVFNQGTVSVSFKGKALGEVKDPRFATALLKVWLGAHPAQESLKAALLGQESKSN*