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SCN18_25_1_16_R1_B_scaffold_2924_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 383..2083

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 567.0
  • Bit_score: 993
  • Evalue 1.80e-287
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 567.0
  • Bit_score: 993
  • Evalue 8.90e-287
Pseudouridine synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ITY6_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 585.0
  • Bit_score: 643
  • Evalue 1.60e-181

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1701
ATGACAGCAGAAATCGAGACGATGCCGAGCGCCGCGCAGGGCGCGCCCGAAACGCCGCCCGCGGCCGAGAACCGGCCGGAAAACGGCAAGCCGCGGGGGCGCAAGCTGCGCACGCCGTTTCGCCGCCGCCGGGGAGATGCCCAGCAGGCCGGCGCCCAGGGTGGCGAGGCCCGCGAGGCCGAGGCCGCCGAGGCCGTCGACGCGGGTTCGGCGGAAGAAGCCGACCGCGCCCTGGATTACCTGAAGGACGCCCATCCGACCGCCCGGCGCCTGGACCGCTACCTGAACAGCGACGTCCTGATGCCGAAGCTGCACAAGGTCCTGGCCGACGCGGGCGTGGGCTCGCGGCGCGAGATGGAAGAGCTGATCGTCGCCGGCCGCGTCTCGGTCAATGGCGAGCCCGCCCACGTGGGCCAGCGCATCGGCCCGGACGACAAGGTCCGCGTCAACGGCCGCCTGGTGACCCGTCCCAAGGCGGGCAAGCTGCCCCGCGTGATCCTCTATCACAAGCCGGCCGGCGAAATCGTCAGCCATGACGACCCCGAAGGCCGGGCTTCCGTGTTCGCCCGCCTGCCGCGCATCCGCACCGGCAAGTGGCTGTCGGTGGGGCGCCTGGACCTGAACACCGAGGGCCTGCTGATCCTGACGACCTCGGGCGACCTCGCCAACCGGCTGTCGCATCCGCGCTACGGGGCGGAACGCGAATACGCGGTCCGCATCCTGGGCGAACTGGGCGAAGCGGAACAGGCCCGCCTGACCAGCGGCATCCAGCTGGAAGACGGCGAGGCCCGGTTCAATTCCCTGGACTACATCGGCGGCGAAGGCAGCAATCGCTGGTACCGGGTCACGCTCAGCGAGGGCCGCAACCGCGAAGTGCGGCGTATGTTCGAGGCGGCGGGGGTGACCGTCAGCCGCCTGATCCGCACGCGCTTCGGCGACGTGATGCTGCCCACCAACCTGCGCCGGGGGCGCTGGGACGAGCTGGATTCCGGCCTGGTCGGGGCGCTGATGGTCCAGCTGGGCCTGCTGCGCGGCGCCGACGAGGACGACAGCCAGTCCGAGCGCCAGCCCCTGTCGCATGCCAGCGCCCTGCCGCCGGGATTCGGCACGCCGGGCCAGAATGGCCAGAACGGCGCGCGCCTGAACCGCCGGGGGAAGGTGTCGGGCGGCCGCAAGGGCGGCATCGATCCGTTCACCACCGGGCTGCTCATCAGCGGCGGGCTGGCCAACGGCCATCCGGATGGCGGCAAGGCCCGCCAGGACGCGAAGCCCGGCCGCAAGCCGGCCAGGAAATCCCATGCCCAGGGCTTCGACGCCCAGGACGCGCATGCCGAAGGCCGGCCCGCCTCGAACCGGCCGGCCCGGCCCGCCCGTCCGGGGAAACCGGGCAAGCCCGCCGGCGCCCCCGGAAAAACCGCGGGGAAACCCGCCGGCAAGCCGGCCCGGTCCGGCAAGCCTGGCGCCGGCAAGCCCGGCAAGCATGCCCAGGGCGGGGCGGGCCAGCCCCAGGCCGACATGGCGCCCGCGTCGGCGCGCCCGCCCAAGGCCGCCCAGAAGCCCGGCCGCAAGCCGGGTGGCAAGCCGGGCAACAAATCCCCCCGCAAGCAGGCGGGCGGCGAGGGCGGGGGCGGCGAACGCCAGCCCCGGGGCGCCCATGCGCACGAATCGCGCCTGGGTTTCCTGGGGGGGCGCGGCCGCTGA
PROTEIN sequence
Length: 567
MTAEIETMPSAAQGAPETPPAAENRPENGKPRGRKLRTPFRRRRGDAQQAGAQGGEAREAEAAEAVDAGSAEEADRALDYLKDAHPTARRLDRYLNSDVLMPKLHKVLADAGVGSRREMEELIVAGRVSVNGEPAHVGQRIGPDDKVRVNGRLVTRPKAGKLPRVILYHKPAGEIVSHDDPEGRASVFARLPRIRTGKWLSVGRLDLNTEGLLILTTSGDLANRLSHPRYGAEREYAVRILGELGEAEQARLTSGIQLEDGEARFNSLDYIGGEGSNRWYRVTLSEGRNREVRRMFEAAGVTVSRLIRTRFGDVMLPTNLRRGRWDELDSGLVGALMVQLGLLRGADEDDSQSERQPLSHASALPPGFGTPGQNGQNGARLNRRGKVSGGRKGGIDPFTTGLLISGGLANGHPDGGKARQDAKPGRKPARKSHAQGFDAQDAHAEGRPASNRPARPARPGKPGKPAGAPGKTAGKPAGKPARSGKPGAGKPGKHAQGGAGQPQADMAPASARPPKAAQKPGRKPGGKPGNKSPRKQAGGEGGGGERQPRGAHAHESRLGFLGGRGR*