ggKbase home page

SCN18_25_1_16_R1_B_scaffold_2998_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1195..1953)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 252.0
  • Bit_score: 475
  • Evalue 7.30e-132
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CDM24995.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 252.0
  • Bit_score: 475
  • Evalue 3.60e-131
tRNA pseudouridine synthase B n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC6_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 251.0
  • Bit_score: 370
  • Evalue 1.20e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGGCTTCCCGACGCGGGCAGATGCTCGACGGAGTCCTGTTGCTGGACAAACCGGAGGGCCTGTCGAGCAACCATGCGCTGCAGCGCGCCAAGCGGACCGTGGACGCCCGCAAGGCGGGCCATACCGGCACGCTGGACCCGTTCGCCACGGGCCTGCTGATCTGCTGTTTCGGCCGGGCGACGAAGATTTCCGCCGCCATGCTGGAAGCCGACAAGGTCTACGAGGCGACCCTGGCCTTCGGCGAGGAGACCGACAGCGGCGACCTGACGGGCCACGTCACGGCGCGCGCGCCGGATGATTTTTCCGGCGTGGACGCCGCCGCGCTGGAGGCCGCGCTGGCCGCGTTCCGGGGCGAGATCGAGCAGATCCCGCCCATGGTCTCGGCGCTCAAGCGCGACGGCAAGCCGTTGTACGAATACGCCCGCCAGGGCATCGAGCTGGAGCGTCCGCCGCGCCGGATCACGATCCACGCGCTGGACCTGCTGGCATGCGACGGCCGCGGCGCCCGGGTGCGGGTGCATTGCAGCAAGGGCACCTACGTGCGCACCCTGGCCCAGGACATCGGCCGCCGCCTGGGTTGCCTGGCGCACCTGTCGGCCTTGCGGCGCACCGCCGTCGGGCCGTTTTCGATCGAGCGGGCCGTGGGGCTGGAAGCCCTGCAGGCCATGGAAGCGCCGGCGACGGCGCTGATCTCTTTACACGCCTTGCCGGACGGCCTGCGCCCGGCAAGTGTTTCCACCGAGGAAAACATTCTATGA
PROTEIN sequence
Length: 253
MASRRGQMLDGVLLLDKPEGLSSNHALQRAKRTVDARKAGHTGTLDPFATGLLICCFGRATKISAAMLEADKVYEATLAFGEETDSGDLTGHVTARAPDDFSGVDAAALEAALAAFRGEIEQIPPMVSALKRDGKPLYEYARQGIELERPPRRITIHALDLLACDGRGARVRVHCSKGTYVRTLAQDIGRRLGCLAHLSALRRTAVGPFSIERAVGLEALQAMEAPATALISLHALPDGLRPASVSTEENIL*