ggKbase home page

SCN18_25_1_16_R1_B_scaffold_3015_5

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 4326..4520

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 65.0
  • Bit_score: 135
  • Evalue 4.60e-30
Choline dehydrogenase {ECO:0000313|EMBL:CDM22870.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CDM22870.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 65.0
  • Bit_score: 135
  • Evalue 2.30e-29
choline dehydrogenase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000381C8CA similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 102
  • Evalue 1.50e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGACCGCAGGAACGCCGGACGCCGCCGCGCTGGAATTCGATTACGTCATCGTGGGCGCCGGCTCGGCCGGCTGCCTGCTGGCCAACCGCCTGTCGCGCGAACACCGGGTCCTGCTGCTCGAGGCGGGCGGCACCGACGACTGGCGCTGGATCCACATCCCCGTCGGCTACCTGTATTGCATCGGCAACCCGCGC
PROTEIN sequence
Length: 65
MTAGTPDAAALEFDYVIVGAGSAGCLLANRLSREHRVLLLEAGGTDDWRWIHIPVGYLYCIGNPR