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SCN18_25_1_16_R1_B_scaffold_4024_4

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(3236..3475)

Top 3 Functional Annotations

Value Algorithm Source
Anti-sigma-28 factor FlgM n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPG9_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 81.0
  • Bit_score: 100
  • Evalue 4.20e-19
Negative regulator of flagellin synthesis FlgM similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 79.0
  • Bit_score: 129
  • Evalue 4.00e-28
Negative regulator of flagellin synthesis FlgM {ECO:0000313|EMBL:CDM24830.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 79.0
  • Bit_score: 129
  • Evalue 2.00e-27

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GGGGGAACGCGCGGCGACACGGCCTCCCATGCCGCGTCCGGCACGGCCGCCAGCGGCCGCACGGCGGTCGACCTCAGCCCGGCGGCCCGTCATCTGGCCGCCCTGAACGACAGCGACGCCGACGTACAGGCCGCCCGCGTCCAGCGGATCCGCGACGCGCTGGCCTCCGGCGAACTGAAGATCGACCCCGGCAAGATCGCCGACGGCCTGCTGGCCAGCGTGCGTGACCTACTGAAATGA
PROTEIN sequence
Length: 80
GGTRGDTASHAASGTAASGRTAVDLSPAARHLAALNDSDADVQAARVQRIRDALASGELKIDPGKIADGLLASVRDLLK*