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SCN18_25_1_16_R1_B_scaffold_4189_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 3..449

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MBG8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 148.0
  • Bit_score: 223
  • Evalue 1.00e-55
ABC transporter, periplasmic spermidine putrescine-binding protein PotD similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 148.0
  • Bit_score: 307
  • Evalue 2.00e-81
ABC transporter, periplasmic spermidine putrescine-binding protein PotD {ECO:0000313|EMBL:CDM25063.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 148.0
  • Bit_score: 307
  • Evalue 1.00e-80

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
CTCGACGAGATCAAGCCCTACGTGCAATGGTGGGAGGCGGGCGCCCAGCCGCCGCAGATGCTGAGCGCCGGCGACGTCGTCATGTCCGCCGCCTACAACGGCCGCATCGACGCGGCGCAGCGCGAGGGCCGGCCCCTGAAGGTCGTCTGGAACCAGAGCGTCTACGACTTCGACTACTGGGTCGTCCCGACCGGCTCGCCAAACAAGGACCAGGCGATCGAGTTCATCCGCTACGCCAGCTCGCCCAAGGCGCAGGCGGCCTACTCCCAGCACATCGCCTACGGGCCGATCAGCAAGGAGGCCATCGGCATGCTCAAGCCCGAGGTCCTGGCCAACGTGCCCAATTCCCCGGCCAATGCCCGCAACGCCCTGTTCAACGACCTGGAGTTCTGGACCGACCACGGCGAAGAACTCGAACAGCGCTTCACGGCCTGGGCCGCCCGCTGA
PROTEIN sequence
Length: 149
LDEIKPYVQWWEAGAQPPQMLSAGDVVMSAAYNGRIDAAQREGRPLKVVWNQSVYDFDYWVVPTGSPNKDQAIEFIRYASSPKAQAAYSQHIAYGPISKEAIGMLKPEVLANVPNSPANARNALFNDLEFWTDHGEELEQRFTAWAAR*