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SCN18_25_1_16_R1_B_scaffold_3614_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1..972

Top 3 Functional Annotations

Value Algorithm Source
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61) similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 323.0
  • Bit_score: 590
  • Evalue 2.60e-166
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTV7_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 323.0
  • Bit_score: 280
  • Evalue 1.60e-72
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 323.0
  • Bit_score: 590
  • Evalue 1.30e-165

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
GCCCTGGTGCCCGCGCTCAGCCCGGACGACGACACGCGCTCGCGCCTGAGCCGTGCCGGCCTGGCCCGGGCGCGCGCCCGCTGGCTGGAACTGGACGAGCCGGCGCGGCCGCAGGCCTGCGGCGCGCTGGTCTGCGCGCAGTCGGAGACGCAGGCGGACCTGCAGCGCCGGGCGCTGGCGCGCCTGGGCTTTCCCGAAGTCTGGGTGCGCTGGCTCGATCCCGCGCAGGCGGGCCTGCGGGCCGGGGTCGGGGTGCCCTGGGGCGGCCTCTGGTTTCCCGGCGCCTTGCGGGTGTGCCCGGGCGAACTGATCGCCGCCTTGCTGGGCCTGCCGGGCGTGACGCGCCGCGCCGCCGCCGTCGGGACGCTGGCCCCGGCGGATGGCGGCGGCTGGTCGCTGCGGGCCGCCGACGGGCGGGAACTGGGACGGGCGGACCAGGTCGTGCTGGCCAACGCCCTGCATGCGCGCGCGCTGCTGGCCGGCGTGGCTCCGGTCGAGCGCCTGCCCGTCCTGTCCGGCCTCGCGCCCCTCGCCGGCCAGGTCAGCCTGTATCCCTCGGGTGAGTCCTCCGTGCCGCGCTGCGTCCTGTCGGGACGCGGCTACTGCCTGCCGCCCCGGGACGGCTGGGGCGTGGCCGGCAGCACCTACCGGCCCGATGCGGCCGAGGCCGTCGCGGACGAGGCCGGCCACCAGGACATCCTGGCGCGCGTGCGGGACTGGGTCGAGGCGCGAGACATCCCCTGGCTGGGGCGCGGCGCGGCCGTCGGGTGGGCCGGCTGGCGGGCCGCCTCGCGCGACCATCTGCCCCTGATCGGGGCGGTGCCGGATCGGCCGGGCCTGTGGCTGGCCTGCGCCTACGGGTCGCGCGGCCTGAGCTGGTCCGCCCTGGCGGGAGACCTGATCGGCGCGTCGCTGGATGGCGAACCGGTGCCCGCCGAGCGCGAGCTGGTCGGGCGTATCGGCCCGCGCTGA
PROTEIN sequence
Length: 324
ALVPALSPDDDTRSRLSRAGLARARARWLELDEPARPQACGALVCAQSETQADLQRRALARLGFPEVWVRWLDPAQAGLRAGVGVPWGGLWFPGALRVCPGELIAALLGLPGVTRRAAAVGTLAPADGGGWSLRAADGRELGRADQVVLANALHARALLAGVAPVERLPVLSGLAPLAGQVSLYPSGESSVPRCVLSGRGYCLPPRDGWGVAGSTYRPDAAEAVADEAGHQDILARVRDWVEARDIPWLGRGAAVGWAGWRAASRDHLPLIGAVPDRPGLWLACAYGSRGLSWSALAGDLIGASLDGEPVPAERELVGRIGPR*