ggKbase home page

SCN18_25_1_16_R1_B_scaffold_5059_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(482..931)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WL25_BORBR similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 149.0
  • Bit_score: 171
  • Evalue 6.20e-40
Membrane protein similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 149.0
  • Bit_score: 274
  • Evalue 1.50e-71
Membrane protein {ECO:0000313|EMBL:CDM24950.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 149.0
  • Bit_score: 274
  • Evalue 7.30e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGCTACTGCAAAAAGACCTGAATCCCGCGCTCAACACCGTCACCGCCTACGGTGACGGCTTCCTGGAAATCAATCGGGTCCGCTACGACAGCGCCATCTGCTTCGCCCCCGAAGGCCCGGTCCGCGGCCTCGCCCTGCGCGCCGCCGCCGACATCGACGCCGCCTTTCTCCAGGACCTGGTCGGCCTGAAACCGGCCGCCCGCGATCCGCTCGCCTTCCTCGACGACGAGGCGCCCGCCCTCGAACTGCCCGCCGACGCGCCGGAAGTCCTGCTGATCGGCACCGGCCCGCGACAGACCTTCCTGCGCCCCGACGTGCTGCGGCCGCTGCTGGCGCTGGGCATCGGCGTCGAAACCATGACCACCCAGGCCGCCGCCCGGACCTACAACATCCTCATGTCCGAGGAACGACGTGTGCTGGCCCTGCTGCTACCCGGAGACCCCTCATGA
PROTEIN sequence
Length: 150
VLLQKDLNPALNTVTAYGDGFLEINRVRYDSAICFAPEGPVRGLALRAAADIDAAFLQDLVGLKPAARDPLAFLDDEAPALELPADAPEVLLIGTGPRQTFLRPDVLRPLLALGIGVETMTTQAAARTYNILMSEERRVLALLLPGDPS*