ggKbase home page

SCN18_25_1_16_R1_B_scaffold_3775_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 2..589

Top 3 Functional Annotations

Value Algorithm Source
Methylisocitrate lyase (EC:4.1.3.30) similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 195.0
  • Bit_score: 365
  • Evalue 4.90e-99
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121, ECO:0000313|EMBL:CDM25080.1}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121, ECO:0000313|EMBL:CDM25080.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 195.0
  • Bit_score: 365
  • Evalue 2.40e-98
2-methylisocitrate lyase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX90_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 193.0
  • Bit_score: 329
  • Evalue 1.40e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
CTGACCAAGTTCGGCGCCGCCGGCTGCCACATCGAGGACCAGGTCGGCGCCAAGCGCTGCGGCCACCGGCCCGGCAAAGAAATCGTCAGCACCGAGGAAATGGCCGACCGCGTGAAGGCCGCCGTCGACGCCCGCACCGACAGCGACTTCTACGTCATCGCGCGCACCGACGCGATCGCCGTCAGCGGCGTGGACGCGGCCCTGGAGCGCGCGCACGCCTGCGTCGAGGCCGGCGCCGACGCGATCTTCGCGGAAGCGTCCTACGACCTGGACACCTACCGGAAATTCTCCAGCAGCCTGAACGTCCCCGTGCTGGCGAACATCACCGAATTCGGCAAGACGCCGCTGTTCACGGTCGAAGAACTCAAGGGCGCGGGCGTGGGCATCGTGCTCTACCCCCTGTCGGCCTTCCGCGCCATGAACAAGGCTGCCGAGACCGTCTATGAAGCCATCCGCCGCGACGGCCACCAGCACCGGGTGCTCGACCTGATGCAGACGCGCGAAGAGCTCTACGACCGGATCGGCTACCACCGCTACGAAGACCAGCTCGACGCCCTGTTCCGGCAGGGCAAGAACAAGGCGTCCTGA
PROTEIN sequence
Length: 196
LTKFGAAGCHIEDQVGAKRCGHRPGKEIVSTEEMADRVKAAVDARTDSDFYVIARTDAIAVSGVDAALERAHACVEAGADAIFAEASYDLDTYRKFSSSLNVPVLANITEFGKTPLFTVEELKGAGVGIVLYPLSAFRAMNKAAETVYEAIRRDGHQHRVLDLMQTREELYDRIGYHRYEDQLDALFRQGKNKAS*