ggKbase home page

SCN18_25_1_16_R1_B_scaffold_3813_4

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(2162..3487)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W963_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 442.0
  • Bit_score: 627
  • Evalue 5.50e-177
TRAP dicarboxylate transporter, DctM subunit similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 438.0
  • Bit_score: 822
  • Evalue 5.60e-236
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:CDM25717.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 438.0
  • Bit_score: 822
  • Evalue 2.80e-235

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGAGCGGGATGGCGGTGGGCCTGAGCGGTCTCGCAGGGCTGCTGGTATTGCTGGTGCTCCGGGTGCAGATCGCGGTGGCGATGCTGCTGGCCGGGGCGGTGATCTACGTGGCCTCCAGCGACTGGGCCTTGAACGGACTGCTGTATACGCTCAGCGACCTGGCCTATGCGCGCCTGTCGAACTACGACCTGGCGGTGGTGCCGCTGTTCATCCTGATGGGGCAGTTCGCCACACACGGCGGGCTGTCCAAGGCGCTGTTCGATGCGGCCGGCAAGCTGATCGGGCACTGGCGCGGGGGCATGGCGATGGCCTCGGTGGCGGCGTGCGCCTCGTTCGGGGCGATCTGCGGCTCGTCGCTGGCCACGGCGGCCACGATGGGGCAGGTGGCGCTGCCCGAGCTGCGCGCGCACGGCTACTCGGGGCGCCTGGCCACGGGCACGCTGGCGGCCAGCGGCACGCTGGGCATCCTGATCCCGCCCTCGGTGCCACTGATCATCTACGCGGTGCTGGTCCAGGACTCCATCGGCAAGCTGTTCATGGCCGCCGTGATTCCCGGCATCCTGGCCGCGCTGGGCTACCTGATCGTGATCCGCATCCTCGTCACGCGCAATCCCGAATCCGGCCCCACCGGCACCAAGGCGCCCAGGGCCGAGGCCCTGGCGGCGCTGATGCGCACCGTGCCCATCATGCTGGTGTTCGTGGTCGTGGTCGTGGGCATCTACGGCGGCTGGGCCAATCCGACCGAGGCGGCGTCCATCGGGGCGGGGGCGTGCGGCGTGATCGCCCTGGCCAACGGCATGCGCTGGGAAGGCACGCGCCAGAGCCTGCTGGGCACGGCGCGGGTCACCGGCATGATCTTCATGGTGCTGATCGGCGCGGACCTGCTGAATTCGTCCCTGGCCCTGTCGCAGATGCCGAACGAGCTGGCGCAATGGGTCATCGACAGCGGCCTGTCGCCCATGATGGTGCTCTTCGTCATCCTGGCGATCTACATCCTGCTGGGCTGCGTCATGGATTCGCTGGCGATGATCCTGCTGACGATCCCGATCTTCTATCCCATGATCATGGGCCTGGATTTCTTCGGCCTGTCGGCGGGCGACAAATCCGTCTGGTTCGGCATCATGACGCTGATGGTGGTCGAGATCGGCCTGGTGCACCCGCCGGTCGGGATGAACCTGTACATCATCAACAAGCTGGCCAAGGACGTACCCATGAAGGAAACGGCGCTGGGGGTGATGCCCTTCCTGGCGTCCGATTTCCTGCGGATCATCGTGCTGGCCTTCTTCCCGGGCATTACCCTGTGGCTGATCCGCGCCCTGGGCTAG
PROTEIN sequence
Length: 442
MSGMAVGLSGLAGLLVLLVLRVQIAVAMLLAGAVIYVASSDWALNGLLYTLSDLAYARLSNYDLAVVPLFILMGQFATHGGLSKALFDAAGKLIGHWRGGMAMASVAACASFGAICGSSLATAATMGQVALPELRAHGYSGRLATGTLAASGTLGILIPPSVPLIIYAVLVQDSIGKLFMAAVIPGILAALGYLIVIRILVTRNPESGPTGTKAPRAEALAALMRTVPIMLVFVVVVVGIYGGWANPTEAASIGAGACGVIALANGMRWEGTRQSLLGTARVTGMIFMVLIGADLLNSSLALSQMPNELAQWVIDSGLSPMMVLFVILAIYILLGCVMDSLAMILLTIPIFYPMIMGLDFFGLSAGDKSVWFGIMTLMVVEIGLVHPPVGMNLYIINKLAKDVPMKETALGVMPFLASDFLRIIVLAFFPGITLWLIRALG*