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SCN18_25_1_16_R1_B_scaffold_3855_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(2..271)

Top 3 Functional Annotations

Value Algorithm Source
TolC family type I secretion outer membrane protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNL4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 81.0
  • Bit_score: 125
  • Evalue 2.40e-26
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EKS39953.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 81.0
  • Bit_score: 125
  • Evalue 3.30e-26
Type I secretion outer membrane protein, TolC similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 81.0
  • Bit_score: 113
  • Evalue 2.00e-23

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGAACTGGCGATCGCTGGAACCCTGGCCGGTGCCGATGTCGAAGCCGCGAAGCGCGCCTTTGATGCGACCGCGGGCGCATTCGTGCCAAACGTGGCCCTTGAGGGGCGTGCACTACGCGGCGTCGATTCGATCATCTATCCCGGACAACGTGACGAAGTGAGCGGCAAGGTCGTCGTGAGCTGCGATATTTTTCGTGGCGGTCAGGATTCCTGGAAGCGCGCGGAAGCTGCGGAGCGCATGGTCGAGGAGCAGCACAAGCACGCGCGG
PROTEIN sequence
Length: 90
MELAIAGTLAGADVEAAKRAFDATAGAFVPNVALEGRALRGVDSIIYPGQRDEVSGKVVVSCDIFRGGQDSWKRAEAAERMVEEQHKHAR