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SCN18_25_1_16_R1_B_scaffold_3855_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 320..1135

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane porin protein n=3 Tax=Bordetella bronchiseptica RepID=K4QRL9_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 296.0
  • Bit_score: 156
  • Evalue 2.90e-35
outer membrane porin protein precursor similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 271.0
  • Bit_score: 531
  • Evalue 9.30e-149
Outer membrane porin protein {ECO:0000313|EMBL:CDM23457.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 271.0
  • Bit_score: 531
  • Evalue 4.60e-148

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGGGCCGCCAGTATTCCGCCGGGGTGGACACCTTCCTGGTGGACAACGGCTTCAACATGGGCGATGCCGACAAGGTCTTCGGCTCCATGGGCATGAACGAAGGCAACCGCGTCGACAATTCCTTCAAGTACACGACGCCCAGCCTGTCGGGCTTCCAGGCCATCGTGATGTATGGGACGGGCGACAGCGGCAGGCTGACGGCCGACGGCTACGAGGCTTCGACGACGGTGGGCCGCGCCAATGGCGTGTCGTTCGACGATCGCGGATCCCGCGTCTCGGTCGGCGTGCTCTATGCCAACGGGCCGATCAGCGCGGGCGCCAGCTATGACCGCCAGAGCGTGTACGGCAACGACCTGAACGGGGGTGACGCCAGCGCGGCCACGAACTGGCAGGTCAACGGGGCCTACGATTTCGAAGTCGTGAAGCTGTCGCTGGCCTATGGCCAGGACCGCCACGGCAAGATCGGCTGGGGCGGCAGCGTCGAAGACTTCGCCGACTTCGCGGGCCTGGGCCTGGGGAACTTCTTCGGCACGGACTTCAAGTCGAACAACTATCACGTGGGCCTGAGCGCGCCCGTGGCGGGCGGAACGGTGTATGCGGGCTGGGGCTATTCGACCTCGAACGCCGACGACCTGGCCCCGGGCGGAGCCGCCGGCGACCTCTCCGGCAGCATCAGCACCTACCACCTCAACTACGTGTACCCGCTGTCCAAGCGCACCAGCGTCTATGCCTACGGCACGTACGGCAAGAACCTGGCCTACGTGAAGGACCTGAAGGGCACCGAAGCCGGTGTCGGCCTGAGCCACAGCTTCTGA
PROTEIN sequence
Length: 272
MGRQYSAGVDTFLVDNGFNMGDADKVFGSMGMNEGNRVDNSFKYTTPSLSGFQAIVMYGTGDSGRLTADGYEASTTVGRANGVSFDDRGSRVSVGVLYANGPISAGASYDRQSVYGNDLNGGDASAATNWQVNGAYDFEVVKLSLAYGQDRHGKIGWGGSVEDFADFAGLGLGNFFGTDFKSNNYHVGLSAPVAGGTVYAGWGYSTSNADDLAPGGAAGDLSGSISTYHLNYVYPLSKRTSVYAYGTYGKNLAYVKDLKGTEAGVGLSHSF*