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SCN18_25_1_16_R1_B_scaffold_5227_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1481..2845

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8H7_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 348.0
  • Bit_score: 308
  • Evalue 5.80e-81
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 375.0
  • Bit_score: 510
  • Evalue 2.80e-142
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM24252.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 375.0
  • Bit_score: 510
  • Evalue 1.40e-141

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
TTGCGACTCGACTCCCTCCCTCGCACCCTGCGGCAGAAGGCCTCGCTGGCCTTCATCCTGGTCGTGCTGCTGGCCATCGGCAACGTGTCCATCGTCCAGTTCCTGCTGCGGGAAAGCGATGGTGTGGCCGCCACGCTGAACGTCGCGGGCAAGATGCGCATGCTCAGCCAGCGCATCGGCCTGGAAGCCCTGGTGGCCCACCAGCATCCTGACCTGCCGGATCCCGACCAGGCGGATCTGCCGTCCCTGTTCGAGGCGGCGCACGACACGCTGCGCCGCGGCGGCCACGCGTTCGGCCTGGACATCGCCCCCGTGCCGGAAGTGCTCGCGCCGCAGCTGAGCGCCGTCGGCCTGGCCTGGATGCGCTATCGCGTCGCCGTCGACGCGCTGGCCGGGGCGCCGGCCGGAGACCGGGACGCCGTGGCGGACCTGGCGCGGACCGGCGCGGATCTGCTGGCGCATACCGAGGCGCTCATGGACGGCCTGGTCGTCCAGGCCCGGACGGTCCAGCAGCGGACCCTCTACGGCGCCTATGCCCTGTTCGCGCTGGACCTTGTCCTTTTGGCCCTGGCCGGCTGGGTGGTCTTCCGCCGGATCCTGCGGCCCATCCGCGACCTGGTGAAACAGTGCCGGGCCCTGGCGGCGGGCGACTACGCCGCCCGCTCGGCGCTGCCGCCCGGCGACGAACTGGGCGAACTGGGCCGGGTGCTGAACGATTCCGCGGCGCACATCGAGCAGTTGCTGCGGGACATCGAAAGAGAGCACGCGGCGCTGGCCGAGGCCCAGGCCATGTTCAACGGCCTGTCGGACAACACGGTCGCGGGCATCTACATGGCCGACGAGAACCTGCGCTTCATCCATGCCAATGCCCGGATGGCGGAAATCCTGGGCTATCCCCAGGCCGAGCTGGCCGCGGGCCTTCCCTTCGGGCGCGTGTTCGTCGGGCCGGCCTACGAGGTGGCCCGCGCCCAGGCGCTGGAGTGGCTGTCGGGGCGCGCGGCCCGGACACGCTACGAGTGCGTGGCGCGGCGCCGCGACGGCGATCCGATCGAACTGGAAATCTTCGGCTCGCTGATGTCCCTGCACGGCCGGCCGGACACGGGCGACAGCCAGTACCGCAGCATCCAGTCACGCCCGCTTCGTCACGCGGAGAGGCGGTGGCCACGGGGAAGGGAATCGGGTCAGCGGGACGGCTTGCCTGCCGCCAAGCGCCAGGACGGCTGGCCGACGGGTTCGCCGGCAATGTGCTTCGGGGTCTGGCTGGGGTACAGCGTATCGACCGGTTTGCCGTCGGGGTCGAGCTCCGGCGACCGTGTGAAGCTGCCTGAAAAGCCGGGGAATTCGTGTGGTCGGGCGTGGCTGAGT
PROTEIN sequence
Length: 455
LRLDSLPRTLRQKASLAFILVVLLAIGNVSIVQFLLRESDGVAATLNVAGKMRMLSQRIGLEALVAHQHPDLPDPDQADLPSLFEAAHDTLRRGGHAFGLDIAPVPEVLAPQLSAVGLAWMRYRVAVDALAGAPAGDRDAVADLARTGADLLAHTEALMDGLVVQARTVQQRTLYGAYALFALDLVLLALAGWVVFRRILRPIRDLVKQCRALAAGDYAARSALPPGDELGELGRVLNDSAAHIEQLLRDIEREHAALAEAQAMFNGLSDNTVAGIYMADENLRFIHANARMAEILGYPQAELAAGLPFGRVFVGPAYEVARAQALEWLSGRAARTRYECVARRRDGDPIELEIFGSLMSLHGRPDTGDSQYRSIQSRPLRHAERRWPRGRESGQRDGLPAAKRQDGWPTGSPAMCFGVWLGYSVSTGLPSGSSSGDRVKLPEKPGNSCGRAWLS