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SCN18_25_1_16_R1_B_scaffold_4541_5

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 2467..3171

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein PgaA n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T5B4_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 211.0
  • Bit_score: 192
  • Evalue 3.10e-46
Outer membrane protein PgaA {ECO:0000313|EMBL:EGP44542.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 211.0
  • Bit_score: 192
  • Evalue 4.40e-46
Biofilm PGA outer membrane secretin PgaA similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 211.0
  • Bit_score: 187
  • Evalue 2.90e-45

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAGACCCGCCGTGAACCACGCCCTGCGCTTCGCCGCATTTACTTTTTGCACACTCCTGGCACTTCCCGCCACCGGCGAGGAAGCCACCGCCGTCCTGCGGGCGTACGAACGGGCCGGATCGCCCGCGACGCTGCCCGCCCCCGCATTGGAAGCGGTGGCGCGCGCATACCGGGACACGCAACAGTGGCCATCGGCCATCCGATTGTTCAGCCAGGGAGAACGGCGGTTTCCCGGCCAGGCGACGTTCGCCTACGGACACGTCATGACCCTGGCGGACGCGGGACGCCCGCACGAAGCGATCGAACGCGGCAAGGCCCTCGTGGCGCACCGCCCCGACGATCCGGATGCGCATCTCGCGCTGGCTTACGCGCATGGCCGGAACGCGGAACCGTACGCGGCTCTGGAGCACGCATCCCAGGCCTACTCCCTGGCCCCGAACCGTCCTTACGTCGTGCGCGCCTACGTGCTGGCCCTGCGGGATGCGCGGCTGCCGCAAAGCGCCCTCCATCTGGCCGCCGCGCATCCGGGCCTGCTGAGCCCGGCGCAGACCCGATCCCTGCAGGCCGACGTCGCGGCCCGGCTGACCCGGACCGCGTCGGCCGACGCCCAGGGCGAAGCCGACCGCTACGTCCAGGCGGACCGGGCGCTGGCCCTGTACGGCCAGTTGATCCCGCAATGGCGCGCCCTGGGCCCGCAGGCCCGC
PROTEIN sequence
Length: 235
MRPAVNHALRFAAFTFCTLLALPATGEEATAVLRAYERAGSPATLPAPALEAVARAYRDTQQWPSAIRLFSQGERRFPGQATFAYGHVMTLADAGRPHEAIERGKALVAHRPDDPDAHLALAYAHGRNAEPYAALEHASQAYSLAPNRPYVVRAYVLALRDARLPQSALHLAAAHPGLLSPAQTRSLQADVAARLTRTASADAQGEADRYVQADRALALYGQLIPQWRALGPQAR