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SCN18_25_1_16_R1_B_scaffold_5928_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(912..2195)

Top 3 Functional Annotations

Value Algorithm Source
Histidyl-tRNA synthetase (EC:6.1.1.21) similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 427.0
  • Bit_score: 832
  • Evalue 4.00e-239
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 427.0
  • Bit_score: 832
  • Evalue 2.00e-238
Histidine--tRNA ligase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1YFV2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 428.0
  • Bit_score: 688
  • Evalue 2.50e-195

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGTCCGAATTCAAGAAAGTCGCCGGCCTGACCGGCATGAAGGATGCCTTGCCGCCGGAAACGGCGCGCTGGGAACGGCTCGAGGCCATCGTGCGCGACTGGCTGGCCGGCTACGGCTACCAGAACCTGCGCACGCCGGTGCTGGAGCACACCCGCCTGTTCGCGCGCGGCATCGGCGAGGTCACCGACATCGTCGAAAAGGAAATGTATTCCTTCGTCGACCCCCTGAACGACGAACGCCTGACGATGCGGCCCGAATTCACCGCCGGCATCGTGCGCTCGGTGATCGAGCACAATTTCCTCTACGACCGGCCGCGCCGCGTCTATGCGATGGGGCCGGTGTTCCGGCACGAACGCCCGCAGCGCGGTCGCTACCGCCAGTTCCACCAGATCGACGTCGAGGCCCTGGGCTTTCCCGGGCCGGACGTGGACGCGGAACTGATCCTGATGCTGGCGCGCCTGTGGCGTCTGCTGGGCCTGAAGGACATCCGCCTGGAACTCAATTCCCTGGGCCAGGCGCAAGAGCGCGCCGCCCACCGCGCGGCCCTGGTCGCGCACCTGGAAAAGCACGTCGACGTGCTCGACGAGGAAGCCCGCCGCCGCATGCACAGCAATCCGCTGCGCGTGCTGGACACCAAGAACCCCGCCATGCAGGAGATGGCCAACGCCGCGCCGCGCCTGTTCGACTTCCTGGGCGCCGAGTCCCTGGCGCACTACCGGGGCCTGTGCGACCGGCTGGACGACGCCGGGATCGCCTACACGCTGAATCCGCGCCTGGTGCGCGGGCTGGACTACTACAACCTGACGGTCTTCGAATGGGTCACGGACCGCCTGGGCGCCCAGGGCACGGTCTGCGGCGGCGGCCGCTACGACGGCCTGATCGAACTGCTGGGCGGCAAGCCCGCGCCGGCAGTGGGTTTCGCCATCGGCATGGAACGCCTGCTCGACCTCTGGCAGCAGGACGCGCCCGGCCAGGACCCGGCCGAATGCCAGGTCTACCTGGTCCACCAGGGCGACGCCGCCCAGCGGCGCGCGGCGCGATTGGCCGAGTCCCTGCGCGACGCCGGGCTCAGGGCACTTGTCCACGCTGGTTCGACTGGGTTTAAATCACAGTTTCGCCGGGCCGACGCCAGCGGCGCCGTGGCCGCCGTCGTCATCGGCGAGGACGAGCTGGCCTCGGGTCTGGCGACCGTGAAATGGCTGCGCGCCGGCGCCGCCGGGGACGGACAGCAGGAATCGGTCGCCTTCGACCGGCTGGCCGCGCAACTCCAACAAAGGATCTGA
PROTEIN sequence
Length: 428
MSEFKKVAGLTGMKDALPPETARWERLEAIVRDWLAGYGYQNLRTPVLEHTRLFARGIGEVTDIVEKEMYSFVDPLNDERLTMRPEFTAGIVRSVIEHNFLYDRPRRVYAMGPVFRHERPQRGRYRQFHQIDVEALGFPGPDVDAELILMLARLWRLLGLKDIRLELNSLGQAQERAAHRAALVAHLEKHVDVLDEEARRRMHSNPLRVLDTKNPAMQEMANAAPRLFDFLGAESLAHYRGLCDRLDDAGIAYTLNPRLVRGLDYYNLTVFEWVTDRLGAQGTVCGGGRYDGLIELLGGKPAPAVGFAIGMERLLDLWQQDAPGQDPAECQVYLVHQGDAAQRRAARLAESLRDAGLRALVHAGSTGFKSQFRRADASGAVAAVVIGEDELASGLATVKWLRAGAAGDGQQESVAFDRLAAQLQQRI*