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SCN18_25_1_16_R1_B_scaffold_5928_4

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(2200..2583)

Top 3 Functional Annotations

Value Algorithm Source
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 124.0
  • Bit_score: 253
  • Evalue 2.30e-65
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795, ECO:0000313|EMBL:CDM24134.1};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 124.0
  • Bit_score: 253
  • Evalue 1.10e-64
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Pusillimonas noertemannii RepID=UPI00030B095F similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 119.0
  • Bit_score: 210
  • Evalue 6.00e-52

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
GCCTGCCCGGGCTGCGGGCGCACCAGCAGCACGGTGTTCCAGGAACTGGCCGCCAGCATCCAGGCCTTCCTGCGCGCGCAGATGCCGGTCTGGAAGACCCGCTACCCGGGCGTCGAGAACATGCACGTGGCCGTCATGGGCTGCGTCGTCAACGGCCCCGGCGAAAGCCGCCACGCCGACATCGGCATCAGCCTGCCGGGCACGGGCGAAGTCCCGTCCGCGCCGGTGTACGTCGACGGCGAGCGCACCGTGACGCTCAAGGGCGACCATATTGCCCAGGAATTCCAGGCCATCGTCGAAAACTACGTGGCCCGGCGCTACGGACGGGAACCGGGCGCCGAGCCCGCGCGCCGCCCGGGCGTCGTGGCGCGCTCCATTGACTGA
PROTEIN sequence
Length: 128
ACPGCGRTSSTVFQELAASIQAFLRAQMPVWKTRYPGVENMHVAVMGCVVNGPGESRHADIGISLPGTGEVPSAPVYVDGERTVTLKGDHIAQEFQAIVENYVARRYGREPGAEPARRPGVVARSID*