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SCN18_25_1_16_R1_B_scaffold_6134_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(3..182)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DB92A3 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 59.0
  • Bit_score: 95
  • Evalue 1.00e-17
RNA binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 117
  • Evalue 1.20e-24
RNA binding protein {ECO:0000313|EMBL:CDM23360.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 117
  • Evalue 6.00e-24

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGCCGAAACTCGAACTGACCTCTCAGCAGCGCAGCGCCCTGCGCGCCGCCGCCCATCCCCTGCATCCCGTCGTCCTGATCGGCGACCGCGGCCTGACCGCCGCTGTGCTGGAAGAAATCGACCGCACCCTGGCGGCCCATGAACTGATCAAGATCCGTGTCGCCGGCGCCGAGCGCGAC
PROTEIN sequence
Length: 60
MPKLELTSQQRSALRAAAHPLHPVVLIGDRGLTAAVLEEIDRTLAAHELIKIRVAGAERD