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SCN18_25_1_16_R1_B_scaffold_6134_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 200..868

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 215.0
  • Bit_score: 396
  • Evalue 1.90e-107
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RLME_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 211.0
  • Bit_score: 350
  • Evalue 6.50e-94
Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 215.0
  • Bit_score: 396
  • Evalue 3.80e-108

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGCCAAGAAAAAATTCTCCAAAGCCTGGGTCCAGCGGCATATTCACGACCCTTACGTCAAAATGGCGCAACAGAAGGGCTACCGCGCCCGCGCCGCCTTCAAGCTGGTCGAAATCCTGGATGCGGAAAAACTGCTGCGGCGCGGCGACGTGGTCGTGGACCTGGGCTCGGCCCCGGGCAGCTGGTCGCAGGTCGTGCGCGAGCGCCTGCTGGCGGCCGGCGGCGTGATCGACGGCCGCGTGCTGGCGCTCGACCTGCTGCCCATGGAACCCGTCGCCGGGGTGGAATTCATCCAGGGCGACTTCCGCGAGGACGCCATCCTGGCGCAGCTGCACGAGCGGCTGGAAGGACGGGCCGTGGACCTTGTGATTTCCGACATGGCCCCCAATCTATCGGGTGTGGCCTCGGCGGATTCCGCCCGCATCGCCCACGTCTGCGAACTGGCGCTGGAATTCGCCTGCGATCACCTCAAGCCGGACGGCGCCCTGATCGTCAAGGCCTTCCACGGCAGCGGGTTTTCCCAGATCGTGCAGATGTTCAAGCAGCGCTTCGTCCGGGTGGTCGAACGCAAGCCCAAGGCGTCCCGGGACGAGTCCTCCGAGACCTTTCTCGTGGGGCGCGGCTTGAAAGAGGCTCCCGCGTCCGGGCGGCGGATTCAGGTAGAATGA
PROTEIN sequence
Length: 223
MAKKKFSKAWVQRHIHDPYVKMAQQKGYRARAAFKLVEILDAEKLLRRGDVVVDLGSAPGSWSQVVRERLLAAGGVIDGRVLALDLLPMEPVAGVEFIQGDFREDAILAQLHERLEGRAVDLVISDMAPNLSGVASADSARIAHVCELALEFACDHLKPDGALIVKAFHGSGFSQIVQMFKQRFVRVVERKPKASRDESSETFLVGRGLKEAPASGRRIQVE*