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SCN18_25_1_16_R1_B_scaffold_8810_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(488..1477)

Top 3 Functional Annotations

Value Algorithm Source
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Herbaspirillum sp. CF444 RepID=J2UMI6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 329.0
  • Bit_score: 464
  • Evalue 4.60e-128
TRAP-type C4-dicarboxylate transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 328.0
  • Bit_score: 615
  • Evalue 7.80e-174
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CDM25673.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 328.0
  • Bit_score: 615
  • Evalue 3.80e-173

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAAGCCGTTTTCCCTCCTGCTGGCCTGCGCCCTCGCCTGGGCGCCCCTCGCCGCGCACGCCCAGGAACCGATCCTCATCAAGTTCAGCCACGTGGTCGCGCCGGACACGCCCAAGGGCAAGGCGGCGGAACGGTTCAAGGAACTGGCCGAACGGGCGACGGAGGGACGGGTGCGCGTGCTCGTCCACCCGAACAGCCAGCTCTACCAGGACCGGGAGGAACTCGAGGCGCTGCAGCTGGGCGCCGTGCAGATGCTCGCGCCGTCGCTGTCCAAGTTCAGCCCGCTGGGCGTGCGTGAATTCGAGGTGTTCGACCTGCCCTTCTTCTTTCCGGACAAGGAGGCGCTGCACCGGATCACCGAAGGTCCGATCGGCAGGGACCTGCTGCGCCGCCTGCAGCCCAAGGGCCTGATCGGCCTGGCCTTCTGGGACAACGGCTTCAAGGTCATGTCGGCGAACCGGCCCCTGCGCCTGCCGGCCGATTTCCAGGGCCTGCGCATGCGCATCCAGCCCTCGCGGGTCCTCGACGCGCAGATGCGGGCGCTCGGCGCCAGCCCCATGATCCTGAGGTTCGGCGAGGTCTACCACGCACTGCAATCGGGCGTGGTGGACGGCACCGAGAACCCGCCCTCCAACTTCTACACCCAGAGCATGCAGGACGTGCAATCCCACCTGACGGTTTCCCGGCACGGGTACCTCGGCTATGCCGTTGTGGTCAACCGGAAATTCTGGGAAGGCCTGCCTCCGGGGATCCGCTCGGCGCTCGAGGACGCCATGCGCGAGGCCACGCGCTATGCCAACACGATCGCGCAGCAGGAAAACGACCGGGCGCTGGAGGCCGTGCGCGCATCCGGCAAGACGGAAATCCACATGCTGGACGAAGAGGAGCGCCGGCGGTGGCGGGACGCACTGGCGGCGACGACCGCCGAAATGGAGGCGCGCATCGGCAAGGACCTGGTCGACGAGATCCGGAACGAGATCGCCCCCTGA
PROTEIN sequence
Length: 330
MKPFSLLLACALAWAPLAAHAQEPILIKFSHVVAPDTPKGKAAERFKELAERATEGRVRVLVHPNSQLYQDREELEALQLGAVQMLAPSLSKFSPLGVREFEVFDLPFFFPDKEALHRITEGPIGRDLLRRLQPKGLIGLAFWDNGFKVMSANRPLRLPADFQGLRMRIQPSRVLDAQMRALGASPMILRFGEVYHALQSGVVDGTENPPSNFYTQSMQDVQSHLTVSRHGYLGYAVVVNRKFWEGLPPGIRSALEDAMREATRYANTIAQQENDRALEAVRASGKTEIHMLDEEERRRWRDALAATTAEMEARIGKDLVDEIRNEIAP*